Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05280 ATGGCGCAGCAACCACTGGAGCAAGTACAGTGCTTCGGCCGCAAGAAGACTGCGGTGGCCGTCACATACTGCAAGAGAGGACGCGGCCTCATCAAGATCAACGGTTGCCCAATCGAGCTTGTGGAGCCGGAGATCCTGCGGTTCAAGGCGTTCGAGCCAATCCTGCTGCTCGGAAGGCACCGATTCGCCGGCGTTGACATGCGCATCCGCGTGAAGGGAGGAGGACACACTTCTCAGATCTACGCCATAAGGCAGAGCATAGCGAAGGCTCTTGTTGCGTTCTACCAGAAGTATGTGGACGAGCAGAGCAAGAAGGAGATCAAGGACATTCTTGTCAGGTACGACCGAACCCTCCTCGTCGCCGATCCAAGGCGCTGCGAGCCCAAGAAGTTCGGTGGTCGTGGTGCTCGTGCTAGGTTCCAGAAGTCCTACCGTTAA 438 0.5731 MAQQPLEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05280 145 Pfam Ribosomal protein S9/S16 13 145 IPR000754 GO:0003735|GO:0005840|GO:0006412
Arst3g05280 145 SUPERFAMILY Ribosomal protein S5 domain 2-like 8 145 IPR020568 -
Arst3g05280 145 PANTHER RIBOSOMAL PROTEIN S9 6 142 IPR000754 GO:0003735|GO:0005840|GO:0006412
Arst3g05280 145 FunFam 40S ribosomal protein S16 1 145 - -
Arst3g05280 145 Gene3D - 1 145 IPR014721 -
Arst3g05280 145 ProSitePatterns Ribosomal protein S9 signature. 73 91 IPR020574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05280 Arst-Chr3 127943268 127943954 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05280 1 145 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 88.356 5.75e-94 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05280 K02960 - mnt:21383843 284.263