Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05269 ATGGTGTCAAGATCTTATTCAAATCTACTGGAGCTGGCATCGGGTGAGTCTCCATCATTTGGGACCATGAACAGGAGAATCCCTCGGATTATGACTGTGGCTGGTTTGATATCCGATGTTGATGATGACCCTGCTGAGAGTGTGTGCTCTGACCCCTCTTCTTCCTCTGTCCACCGTGATAGGATCATCATTGTGGCTAATCAGCTTCCTATAAGGGTTCAGAGAAAGCCAGACGGTAACAGGAACTGGCTCTTCACTTGGGATGACAATTCACTTCTCCTTCAACTCAAAGATGGCTTAGGTGATGATGACACTGAGGTTATCTATGTTGGTTGCCTCAAAGAGGAAGTGCATCCAAATGAACAAGATGAGGTTTCTCAGATACTTCTTGAGACTTTCAAGTGTGTCCCTACTTTTCTCCCTCCTGATCTCTTCACCAGGTACTACCATGGCTTCTGCAAGCAACAGTTATGGCCACTGTTCCATTACATGCTGCCTTTGTCACCAGACCTTGGAGGCAGGTTCAATAGGTCACTGTGGCAGGCTTATGTATCTGTCAATAAAATCTTTGCAGATAGGATTATGGAAGTTATTAACCCTGAGGATGATTATGTCTGGATACATGATTATCATCTCATGGTGTTGCCAACTTTCTTGAGGAAGAGATTCAACAGAGTCAAACTTGGGTTTTTCCTACATAGTCCATTTCCTTCATCGGAAATATACAAGACATTGCCTATTAGGGAAGAACTCCTGAGAGCACTTTTGAATTCAGATTTGATTGGATTCCACACCTTTGACTATGCAAGGCATTTTCTCTCATGTTGTGGTAGGATGCTTGGTCTAACCTATGAGTCCAAAAGGGGTTATATTGGGATTGAGTATTATGGTAGAACTGTTAGTATCAAGATTCTTCCCGTTGGGATTCACTTGGGACAGCTTCAATCAGTTTTAAGCATGTCCAAGACTGAAGAGAAAGTTTCTGAGCTTATTACACAGTTTACTGATGAAGGCAAGATAATGTTACTTGGTGTTGATGACATGGACATCTTTAAGGGAATAAGTTTGAAGCTATTGGCAATGGAGCAGCTCCTGATTCAGCACCCTGAGTGGCAAGGAAAGGTTGTGTTGGTTCAGATAGCCAACCCTGCAAGGGGAAGAGGGAAGGATGTGAAGGAAGTGCAGGCCGAGACGAAGGCGACCGCGAAACGAATAAACGAAACCTTTGGGAAGCCAGGGTATGATCCTGTTATTCTTATTGAAGAGCCACTGAGGTTTTATGAGAGAGTTGCATACTATGTTGTTGCTGAGTGTTGTTTGGTGACTGCAGTGAGGGATGGAATGAATCTCATACCGTATGAATACATAATCAGTCGTCAAGGGAATGATGGGTTGGACAAAGTTTTGGGAGTAGCTTCCTCTCCAAAGAAAAGCATGCTGGTTGTGTCTGAGTTTATTGGTTGTTCGCCATCTTTGAGTGGCGCAATCAGAGTGAACCCTTGGAACATTGATGCTGTGGCAGATGCAATGGACTCTGCCCTTGAAATGGCTGATTCAGAGAAGCAGCTTCGGCATGAGAAGCATTATAGATATGTTAGTACTCATGATGTAGGTTACTGGGCGCGCAGCTTCTTGCAAGATTTGGAAAGGACTTGTGGTGATCACGTACGGCGAAGGTGGTGGGGGATTGGCTTTGGATTGAGTTTTAGAGTTGTGGCACTTGATCCTAACTTCAGGAAGCTCTCAATGGAGCACATAGTTTCGGCTTACAAGAGGACGACAACTCGGGCGATACTTCTTGATTATGATGGTACATTGATACCTCAGGCATCCATTGATAAGAGCCCAACAAGTAACTCCATTAAGATGCTCAACAGTTTGTGTAGGGATAAGGACAACATGGTGTTTCTCGTCAGTGCTAGAAGCCGAAAGAGGCTTGCAGAATGGTTTTCTCCTTGTGAGAGTCTTGTAATTGCTGCTGAGCATGGTTACTTTCTAAGATTGAAAAGAGATGCAGAATGGGAAACCTGTGGGCCTGCTATAGACTGTAGTTGGAAACAAATTGCAGAACCTGTAATGAAGCTTTATACAGAAACAACTGATGGATCCACCATTGAAGATAAGGAAACTGCACTTGTTTGGTGCTATGAGGATGCAGATCCTGATTTCGGATCATGCCAGGCTAAGGAACTTCTTGATCATCTGGAAAGCGTGCTTGCAAATGAACCGGTAACAGTCAAGAGCGGACAGAACAATGTTGAGGTTATACCACAGGGCGTAAGCAAGGGGCTCGTGGCGAAGCGGCTGCTTTCCATGATGCATGAGAAGGGAATGTCACCTGATTTTGTTTTGTGTATAGGAGATGATCGGTCGGACGAAGACATGTTCGAAGTAATCACCACTTCCATGGCTGGTTCTTCAGCAACACCCAGGGCTGAAGTATTTGCATGTACTGTTGGTAAAAAACCAAGCAAGGCTAAGTACTACCTTGATGACACCGCTGAAATAGTGAGATTGGTGCATGGTTTGGCTTCTGTTTCGGAACAAAAAGTGTTACTCTAG 2562 0.443 MVSRSYSNLLELASGESPSFGTMNRRIPRIMTVAGLISDVDDDPAESVCSDPSSSSVHRDRIIIVANQLPIRVQRKPDGNRNWLFTWDDNSLLLQLKDGLGDDDTEVIYVGCLKEEVHPNEQDEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCGRMLGLTYESKRGYIGIEYYGRTVSIKILPVGIHLGQLQSVLSMSKTEEKVSELITQFTDEGKIMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETKATAKRINETFGKPGYDPVILIEEPLRFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNDGLDKVLGVASSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCGDHVRRRWWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLIPQASIDKSPTSNSIKMLNSLCRDKDNMVFLVSARSRKRLAEWFSPCESLVIAAEHGYFLRLKRDAEWETCGPAIDCSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNNVEVIPQGVSKGLVAKRLLSMMHEKGMSPDFVLCIGDDRSDEDMFEVITTSMAGSSATPRAEVFACTVGKKPSKAKYYLDDTAEIVRLVHGLASVSEQKVLL 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05269 853 CDD GT20_TPS 61 549 IPR001830 GO:0003824|GO:0005992
Arst3g05269 853 NCBIfam trehalose-phosphatase 595 843 IPR003337 GO:0003824|GO:0005992
Arst3g05269 853 FunFam Alpha,alpha-trehalose-phosphate synthase 317 533 - -
Arst3g05269 853 FunFam Trehalose-6-phosphate synthase 2 679 758 - -
Arst3g05269 853 Pfam Glycosyltransferase family 20 61 549 IPR001830 GO:0003824|GO:0005992
Arst3g05269 853 Gene3D Glycogen Phosphorylase B; 317 533 - -
Arst3g05269 853 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 315 - -
Arst3g05269 853 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 844 IPR001830 GO:0003824|GO:0005992
Arst3g05269 853 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 595 712 - -
Arst3g05269 853 Pfam Trehalose-phosphatase 599 833 IPR003337 GO:0003824|GO:0005992
Arst3g05269 853 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 844 IPR001830 GO:0003824|GO:0005992
Arst3g05269 853 FunFam Trehalose-6-phosphate synthase 10 726 853 - -
Arst3g05269 853 Gene3D Glycogen Phosphorylase B; 53 316 - -
Arst3g05269 853 CDD HAD_TPP 597 838 - -
Arst3g05269 853 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 551 - -
Arst3g05269 853 Gene3D - 724 852 IPR023214 -
Arst3g05269 853 Gene3D - 595 723 IPR023214 -
Arst3g05269 853 NCBIfam HAD-IIB family hydrolase 598 801 IPR006379 -
Arst3g05269 853 SUPERFAMILY HAD-like 596 841 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05269 Arst-Chr3 127870314 127873702 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05269 1 849 Trehalose Biosynthesis Gene Families AT1G68020 80.765 0.0 1464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05269 K16055 - cave:132176996 1541.17