Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05262 ATGGCCGCCAACAACAATCCGCATTCTCTCACTGATCAGAATGCAAATTCTATGCCTCTGCTTATTCTTGATCATCAATTCTCCACTACCACTGCTCTTAGGCTTCTGGTCGTTGATCATGATCTTGAACACTTAAGACTTATTCAAGATATGGCTTTTCAATGCAACTATCAAGTGACCACATGCTTCGAGGGTTCTTATGCTTTGAATCTTCTTCGGGAGAGTAGTGGGTGTTTCGATGTGGTACTATGTGATTTTCATATGCCAGGGATAATGGATGATGGTTCTCGCTTACTTGACCATGTTCTCCAAGAATTCAACATTCCTGTCGTAATGATGTGTGCAACAGATGATGAGTCATCAAGTGCAGTGATGGAGGGTATGAAAAAGAAAGGGGCTTGTTATAATTTAGTTAAACCTCTTAGCGAGCAAGATTTGAGGAACATATGGCAGAATGTGGTGGAGAAAACCCAGAAAGAAGTTTGCTATGATGATGATGAAAGCAAAGGAACAGTTAATAGAAGGAAGAGGAGCTTATCAACGGAAAGAGACGATCATGATCATGATGTTCAGCCCAACACTCCTAACAAGAAGCCACGTTTTATTTGGACCACAGAAAGGCATCAAATGTTCGTCGATGCTATACTCCAACTAGGGATTGATAAAGCTGTGCCAAGAAAAATTCTAGAATTGATGGATATCCCTGGTTTGAGAAGGGAAAATGTAATTCTAGAATTGATGGATATCCCTGGTTTGAGAAGGGAAAATGTAGCAAGCCATCTCCAGAAATATCGGATGCATCTTAAGAAGAAAAGTGAGGAGACTAAACAAACAAATAGTGATGGGAAGATAAATGTTAATAGAGAAGCTAACAAGCAACTTTGTGCATCATTGAGGGTTCAAGCTTCCACCAACATTCCTCAAATTACACAAACACTCTGTGCCAAAACATGA 954 0.4004 MAANNNPHSLTDQNANSMPLLILDHQFSTTTALRLLVVDHDLEHLRLIQDMAFQCNYQVTTCFEGSYALNLLRESSGCFDVVLCDFHMPGIMDDGSRLLDHVLQEFNIPVVMMCATDDESSSAVMEGMKKKGACYNLVKPLSEQDLRNIWQNVVEKTQKEVCYDDDESKGTVNRRKRSLSTERDDHDHDVQPNTPNKKPRFIWTTERHQMFVDAILQLGIDKAVPRKILELMDIPGLRRENVILELMDIPGLRRENVASHLQKYRMHLKKKSEETKQTNSDGKINVNREANKQLCASLRVQASTNIPQITQTLCAKT 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05262 317 Gene3D - 194 242 - -
Arst3g05262 317 Gene3D - 243 271 - -
Arst3g05262 317 MobiDBLite consensus disorder prediction 164 199 - -
Arst3g05262 317 PANTHER TWO-COMPONENT RESPONSE REGULATOR 33 275 IPR045279 GO:0009736
Arst3g05262 317 MobiDBLite consensus disorder prediction 164 194 - -
Arst3g05262 317 Gene3D - 32 170 - -
Arst3g05262 317 Pfam Response regulator receiver domain 36 149 IPR001789 GO:0000160
Arst3g05262 317 CDD REC_typeB_ARR-like 36 154 - -
Arst3g05262 317 SUPERFAMILY CheY-like 33 157 IPR011006 -
Arst3g05262 317 SMART REC_2 33 150 IPR001789 GO:0000160
Arst3g05262 317 ProSiteProfiles Response regulatory domain profile. 34 154 IPR001789 GO:0000160
Arst3g05262 317 NCBIfam myb-like DNA-binding domain, SHAQKYF class 198 242 IPR006447 GO:0003677
Arst3g05262 317 SUPERFAMILY Homeodomain-like 196 242 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05262 Arst-Chr3 127816378 127817710 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05262 33 238 Response Regulator Gene Family AT4G16110 40.426 5.27e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst3g05262 Response_reg 6.5e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05262 - K14491 adu:107481409 644.039