Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05242 ATGATTGAGTTTTTTTTATTGTTGTTTGTTTCACAATCATATATAGCTGGGAAGAGGAAGGAGTCTCCTCCTTTACGTAAATTCTCTTTAAAGCAAAGCATTCATCTCCATCGATCTACGAACATGGCTCATCAGCACCATGTTGTGTTGCTGGCGGTGATGATGATCATGCTCTCCGCCATGGCTGACACCGACTCATTCATATTCGGAGGATGCTCTCAGGTGAAGTTCATGCCGGGTTCACCCTACGAGAACACCGTAAACTCCCTCTTAACCTCGCTCATAAACTCAGCCACCTTCACCAACTACAACAACTTCACCATTCAGCCAACTCCCTCTTCCTCCGCCACCGTCTACGGCCTCTACCAGTGCCGCGGCGACCTCTCCAACGACCGCTGCTCCCGCTGCGTGGAGCGTGCCGTCAGTCAGCTGGGCACGCTCTGCCTGGACGCATGCGGCGGCGCGTTGCAGCTGGACGGATGCTTTGTGAAGTACGATAATGTGAGCTTCTTGGGAGTGGAAGACAAGACTGCGGTGATGAAGAAATGTGGACCGTCCATTGGGTTGACCTCCGATGCGATGACCAGGCGGGATGAGGTGCTGGCGTATTTGGAGACGTCAGATGGGAGCACCTATAAGACGTACCGGACGAGTGGGTCGGGGAATGTGCGGGGTGTGGCGCAGTGCACGGGAGACCTCAGCCCAACGGAGTGTCAGGATTGCCTCTCTGATGCAATCCAACGGTTGAAAATGGAGTGCGGAGCATCCACGTGGGGTGACATGTATCTCGCCAAGTGCTACGCGCGATACTCGGAAGGTGGCAGGTACTCGCGCAACAGTAACGATGATAGCAATCACAATGATGATGAAATTGAGAAGACACTAGCCATCTTAATTGGTCTCATAGCTGGTGTTGCTCTAATCATCGTTTTCCTCTCCTTCTTGTCCAAGGTTTGCGAAAAGCACAAAGGTGGTAAATAA 981 0.5199 MIEFFLLLFVSQSYIAGKRKESPPLRKFSLKQSIHLHRSTNMAHQHHVVLLAVMMIMLSAMADTDSFIFGGCSQVKFMPGSPYENTVNSLLTSLINSATFTNYNNFTIQPTPSSSATVYGLYQCRGDLSNDRCSRCVERAVSQLGTLCLDACGGALQLDGCFVKYDNVSFLGVEDKTAVMKKCGPSIGLTSDAMTRRDEVLAYLETSDGSTYKTYRTSGSGNVRGVAQCTGDLSPTECQDCLSDAIQRLKMECGASTWGDMYLAKCYARYSEGGRYSRNSNDDSNHNDDEIEKTLAILIGLIAGVALIIVFLSFLSKVCEKHKGGK 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05242 326 FunFam Cysteine-rich repeat secretory protein 60 191 273 - -
Arst3g05242 326 Pfam Salt stress response/antifungal 72 167 IPR002902 -
Arst3g05242 326 Pfam Salt stress response/antifungal 198 271 IPR002902 -
Arst3g05242 326 Gene3D - 189 273 IPR038408 -
Arst3g05242 326 Gene3D - 64 170 IPR038408 -
Arst3g05242 326 ProSiteProfiles Gnk2-homologous domain profile. 175 275 IPR002902 -
Arst3g05242 326 FunFam cysteine-rich repeat secretory protein 3 64 170 - -
Arst3g05242 326 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 50 319 - -
Arst3g05242 326 ProSiteProfiles Gnk2-homologous domain profile. 65 170 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05242 Arst-Chr3 127646529 127648412 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05242 46 270 Pollen Coat Proteome AT4G20670 24.793 6.26e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05242 - - adu:107481466 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05242 3 127646529 127648412 Arst3g05242 3 127646529 127648412 ECH