Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05184 ATGGTGAATAAAAGAAAAGAGAGGGAAAGTGAAGAAGGAGTGGGAACTAAGAACACTGAAGAATTGAGCAATGAATGGGAGCAGATAAGGGAGGAGGCTGCATCAGTGGCAGCTGCACTACTTGGAGCAAGAAGAGCAAAGAAGCGCTACATTGGCGTGCGCCAACGTCCTTCAGGGCGATGGGTGGCTGAGATCAAAGACACCATACAGAATATTAGGCTGTGGTTAGGCACCTATGACACTGCCGAAGATGCTGCTAGAGCTTATGATGAGGCTGCTCGCTTGCTTCGCGGCGCTAATACCCGCACTAATTTCTTTCCATCACAAGATCCTAATTCTGTTCCAGCTCTTCCTTCAAAGATCGCGAAGCTCCTCCTTCTTAGGCTCAAAGCTAGAAGCATTTCCTCTTCTTGCATGGTTACTACTTTTCCTAGTAACCATTTTGAGCAAGAAAAAAAGGCCGAACCAGAACCAGAACCAGAGCTAGAACTAGAACCAAAACCAGAACCACTTTTTTCTAAACTAATAGAAGAACAAACATACCAATTAGAAAATTTTCTAGATATTGAGGGATATGGGGCTGTTGGAGAGAATTATGATGGTGCTAGTTATGGTTCTGCTGCCACAACTAGTTGTGACTGTAGTACCATTACTTGTGACTATGGTGGAACTAACAATGTAGCAAATTTTGACCAAGAGGTTTGCATGGAGAATTTCAAGATGGAGGATGGTTGTGCTAACAATGTTGATGATGGAAGAAACAATCAAATTGTTAGGCCTAAAGGAGAATTTGAAGACTGCAATGCTGGTTTCATAGACTTCCACTTTTTGGACACTGTTGGATCATTGGTTTGCTCTTCTTCTCCTTTTGAAATAACTGAGGAAATGGTAGGGCCAATGGTGGAAGAGAATTATGATGTGGATGATTCACCATTGCTTAGGATGAAGTATGAAAGAAAATTCTCAGCATGTCTTTATACATTCATTGGTGTTGGTGAGTGTTTGAGGCTGCAGGATCGACCTGAATAG 1029 0.4247 MVNKRKERESEEGVGTKNTEELSNEWEQIREEAASVAAALLGARRAKKRYIGVRQRPSGRWVAEIKDTIQNIRLWLGTYDTAEDAARAYDEAARLLRGANTRTNFFPSQDPNSVPALPSKIAKLLLLRLKARSISSSCMVTTFPSNHFEQEKKAEPEPEPELELEPKPEPLFSKLIEEQTYQLENFLDIEGYGAVGENYDGASYGSAATTSCDCSTITCDYGGTNNVANFDQEVCMENFKMEDGCANNVDDGRNNQIVRPKGEFEDCNAGFIDFHFLDTVGSLVCSSSPFEITEEMVGPMVEENYDVDDSPLLRMKYERKFSACLYTFIGVGECLRLQDRPE 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05184 342 ProSiteProfiles AP2/ERF domain profile. 49 106 IPR001471 GO:0003700|GO:0006355
Arst3g05184 342 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
Arst3g05184 342 Pfam AP2 domain 49 98 IPR001471 GO:0003700|GO:0006355
Arst3g05184 342 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 30 217 - -
Arst3g05184 342 MobiDBLite consensus disorder prediction 1 23 - -
Arst3g05184 342 FunFam ethylene-responsive transcription factor RAP2-11 48 107 - -
Arst3g05184 342 CDD AP2 48 105 IPR001471 GO:0003700|GO:0006355
Arst3g05184 342 SUPERFAMILY DNA-binding domain 49 106 IPR016177 GO:0003677
Arst3g05184 342 PRINTS Ethylene responsive element binding protein signature 72 88 IPR001471 GO:0003700|GO:0006355
Arst3g05184 342 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Arst3g05184 342 Gene3D AP2/ERF domain 48 107 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05184 Arst-Chr3 127201073 127202101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05184 47 108 AP2-EREBP Transcription Factor Family AT5G19790 73.846 3.03e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Arst3g05184 AP2 4.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05184 K09286 - gmx:100793940 303.523