Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05179 ATGAGCTCCGGCGGCGATTCTTCCGGCGGAGGAAGCAGCAGCTCTGCCAACGCCGACAACAAGGAGAAGGACAAGCAGAAGGAGAAGGCTAGGGTGAGTCGCACCTCCTTGATACTGTGGCACGCGCACCAAAACGACGCCGCTGCGGTGCGTAAGCTTCTCCAGGAGGATCCTTCACTCGTCAATGCAAGGGACTACGATAACCGTACTCCTCTCCACGTCGCCGCACTTCACGGCTGGCTCGACGTCGCTAACTGCCTCATCGAGTACGGCGCCGACGTCAACGCTCAGGATCGCTGGAAAAACACCCCTCTTGCTGATGCGGAAGGAGCTAACAGGACTTCGGTGATCGAGCTCCTGAAAACTCACGGTGGATTGTCTTATGGGCAAAATGGTAGCCATTTTGAGGCGAGGCCAGTACCGCCGCCGTTGCCGAACAAGTGTGATTGGGAAGTTGACCCTAACGAGATTGACTTCTCTAACTCCTCGCGTATTGGAAAGGGATCTTTTGGTGAGATTTTAAAAGCCTATTGGCGTGGGACTCCAGTTGCTGTTAAACGCATTCTTCCATCTCTTTCAGATGATCGATTGGTGATTCAGGACTTCAGGCATGAGGTCAATTTGTTGGTGAAGCTTCGACACCCTAATATAGTTCAGTTTCTCGGAGCTGTTACTGACAGGACCCCCCTTATGTTAATTACTGAGTATCTAAGAGGGGGTGATCTTCATCAGTACCTCAAAGACAAAGGTTCATTGAGTCCTTCAACAGCTGTCAACTTTTCCATGGATATTGCCAGAGGCATGGCCTATCTTCACAATGAACCAAATGTTATAATTCATCGAGACCTAAAGCCAAGGAATGTTCTTTTGGTCAATTCTAGTGCCGATCATTTAAAAGTTGGGGATTTTGGATTGAGTAAAATTATCAAGGTCAAAAATGCTCATGATGTATACAAGATGACCGGTGAAACAGGGAGCTACCGCTACATGGCTCCTGAAGTTTTCAAACACCGAAGATATGATAAGAAGGTTGATGTGTACTCCTTTGCAATGATTTTGTATGAGATGCTTGAAGGTGAACCCCCTTTTGCAAGTTATGAACCTTATGATGCAGCCAAACGTGCAGCAGAAGGACACAGACCTACTTTTCGGGCAAAGGGTTATACCCCCGAACTGCAAGAGTTAACGCAACAGAGTTGGGCTGCTGACATGAATCAAAGACCTTCATTTATAGATATCCTTAAACGGCTTGAAAAGATCAAGGAAAATTTACCGTCAGATCATCACTGGCATTTGTTTACTTCATAA 1308 0.4717 MSSGGDSSGGGSSSSANADNKEKDKQKEKARVSRTSLILWHAHQNDAAAVRKLLQEDPSLVNARDYDNRTPLHVAALHGWLDVANCLIEYGADVNAQDRWKNTPLADAEGANRTSVIELLKTHGGLSYGQNGSHFEARPVPPPLPNKCDWEVDPNEIDFSNSSRIGKGSFGEILKAYWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTDRTPLMLITEYLRGGDLHQYLKDKGSLSPSTAVNFSMDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKIIKVKNAHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVYSFAMILYEMLEGEPPFASYEPYDAAKRAAEGHRPTFRAKGYTPELQELTQQSWAADMNQRPSFIDILKRLEKIKENLPSDHHWHLFTS 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05179 435 SMART ANK_2a 67 96 IPR002110 GO:0005515
Arst3g05179 435 ProSiteProfiles Ankyrin repeat region circular profile. 67 99 - -
Arst3g05179 435 FunFam serine/threonine-protein kinase STY46-like 152 238 - -
Arst3g05179 435 Gene3D - 10 135 IPR036770 -
Arst3g05179 435 PIRSF ILK 1 435 - -
Arst3g05179 435 SMART serkin_6 159 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05179 435 ProSitePatterns Protein kinases ATP-binding region signature. 165 186 IPR017441 GO:0005524
Arst3g05179 435 SUPERFAMILY Ankyrin repeat 38 125 IPR036770 -
Arst3g05179 435 MobiDBLite consensus disorder prediction 1 31 - -
Arst3g05179 435 Gene3D Transferase(Phosphotransferase) domain 1 239 431 - -
Arst3g05179 435 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 64 422 - -
Arst3g05179 435 SUPERFAMILY Protein kinase-like (PK-like) 158 430 IPR011009 -
Arst3g05179 435 Gene3D Phosphorylase Kinase; domain 1 143 238 - -
Arst3g05179 435 MobiDBLite consensus disorder prediction 1 17 - -
Arst3g05179 435 ProSiteProfiles Protein kinase domain profile. 159 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05179 435 ProSiteProfiles Ankyrin repeat profile. 67 99 IPR002110 GO:0005515
Arst3g05179 435 FunFam Integrin-linked protein kinase family 238 433 - -
Arst3g05179 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Arst3g05179 435 Pfam Protein tyrosine and serine/threonine kinase 162 417 IPR001245 GO:0004672|GO:0006468
Arst3g05179 435 Pfam Ankyrin repeats (many copies) 53 105 IPR002110 GO:0005515
Arst3g05179 435 CDD STKc_MAP3K-like 165 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05179 Arst-Chr3 127181890 127187550 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05179 1 435 MAP Kinase Kinase Kinase AT1G14000 81.507 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Arst3g05179 PK_Tyr_Ser-Thr 5.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05179 - - adu:107481197 870.152