Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05174 ATGGCTACTGTGTTCTCAGTGTGTTCGGGTTCTTCTGCTTTTCTCTCTCCATGCACTTCGCACACCAGGTGTTTGTCTCTTTTACCCAAAGGATCACCACTTCTTCACCACATCAAGAAACCTTTTTCTGTGAAATCCCTTTCTTCTTTGGAAACTCAAGAAGTATCATCAGTATCAGTGTCACCAGCAGTTACCACCTTCTGGCAATGGCTTAAGGAAGAAGGTGTTATCTCTTCAAAGACACAAGTGAAACCTGGTGTGGTCCCTGAAGGCCTTGGACTTGTTGCAACCAAAGACATATCAAGAAACGAGGTTGTTCTTCAGGTTCCAAAGAGGTTTTGGATTAACCCAGATGCAGTTGCTGCTTCTGAGATTGGGAATGTGTGTAGTGGTCTCAAGCCATGGCTTTCTGTTGCTTTGTTCCTCATTAGGGAGAGGTCAAGGGATGATTCACTTTGGAAGCACTACTTCCCTGTTCTGCCAAAAGAAACTGATTCTACTATATACTGGTCAGAGGAGGAGCTCTCAGAGATTCAAGGTACTCAACTTCTGAACACAACATTGGGTGTGAAAGAGTATGTTCAGAATGAATTTATGAGACTGCAAGAAGAAATCATACTCCCTAACAAGAAGCTTTTTCCTTTTCCTATAACACTGGATGACTTCTTCTGGGCATTTGGAATTCTCAGATCAAGGGCATTTTCTCGACTTCGCAACGAAAATCTGGTTGTTATTCCATTAGCAGACTTGATAAACCACAGTGCAAGAGTAACTACAGAAGATCATGCTTATGAAGTTAAAGGAGCTGCAGGCCTTTTCTCTTGGGATTACTTATTTTCCCTAAGAAGCCCCCTTTCTGTCAAGGCTGGGGAACAGATATATATCCAATATGATTTGAACAAAAGCAACGCCGAGTTGGCTCTGGACTATGGCTTCATCGAACCAAATTCTGACCGTAATGCATATACCTTGACACTTGGAATACCTGAGTCCGACCCTTTCTATGATGACAAACTAGACATTGCAGAGACCAATGGTTTTGGTGAGACAGCATACTTTGACATATTCTACAACCAACCACTTCCACCAGGGATGATTCCATACCTGAGACTTGTAGCTCTAGGAGGTACTGATGCTTTCCTACTGGAAGCGCTATTCAGAAACACTGTCTGGAGTCATCTAGAATTGCCAGTGAGCCGTGACAATGAGGAACTTTTATGCAGGGTGGTTAGAGAGGCCTGCAAATCTGCTCTTGCTGGTTATCATACAACCATTGAAGAGGATAACAAGTTAAAGGAAGCAAAATTAGATTCAAGACTTGCAATAGCAGTCGGAATAAGAGAAGGGGAGAAGAAAGTTCTGCAACAAATTGATGAGGTCTTCAAGGAGAAAGAATTGGAACTGGACCAGTTAGAGTATTACCAAGAAAGGAGGCTCAAGGACCTTGGCCTGTGCGGCGAAAGTGGTGATATACTAGGGGACCTTGAGAAGTTCATGTAA 1500 0.43 MATVFSVCSGSSAFLSPCTSHTRCLSLLPKGSPLLHHIKKPFSVKSLSSLETQEVSSVSVSPAVTTFWQWLKEEGVISSKTQVKPGVVPEGLGLVATKDISRNEVVLQVPKRFWINPDAVAASEIGNVCSGLKPWLSVALFLIRERSRDDSLWKHYFPVLPKETDSTIYWSEEELSEIQGTQLLNTTLGVKEYVQNEFMRLQEEIILPNKKLFPFPITLDDFFWAFGILRSRAFSRLRNENLVVIPLADLINHSARVTTEDHAYEVKGAAGLFSWDYLFSLRSPLSVKAGEQIYIQYDLNKSNAELALDYGFIEPNSDRNAYTLTLGIPESDPFYDDKLDIAETNGFGETAYFDIFYNQPLPPGMIPYLRLVALGGTDAFLLEALFRNTVWSHLELPVSRDNEELLCRVVREACKSALAGYHTTIEEDNKLKEAKLDSRLAIAVGIREGEKKVLQQIDEVFKEKELELDQLEYYQERRLKDLGLCGESGDILGDLEKFM 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05174 499 SMART set_7 79 304 IPR001214 GO:0005515
Arst3g05174 499 ProSiteProfiles Plant LSMT protein-lysine methyltransferase family profile. 37 497 IPR011192 GO:0009507|GO:0030785
Arst3g05174 499 CDD SET_RBCMT 83 313 IPR044431 GO:0016279|GO:0018022
Arst3g05174 499 ProSiteProfiles SET domain profile. 74 298 IPR001214 GO:0005515
Arst3g05174 499 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 63 445 - -
Arst3g05174 499 Pfam SET domain 91 297 IPR001214 GO:0005515
Arst3g05174 499 Gene3D - 314 478 IPR036464 -
Arst3g05174 499 PIRSF RMT_SET 1 498 IPR011192 GO:0009507|GO:0030785
Arst3g05174 499 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 314 478 - -
Arst3g05174 499 Gene3D set domain protein methyltransferase, domain 1 60 313 - -
Arst3g05174 499 Pfam Rubisco LSMT substrate-binding 329 454 IPR015353 -
Arst3g05174 499 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 60 312 - -
Arst3g05174 499 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 321 492 IPR036464 -
Arst3g05174 499 SUPERFAMILY SET domain 61 319 IPR046341 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05174 58 253 NAC Transcription Factor Family AT3G56570 26.214 5.67e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst3g05174 SET 2.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05174 K00592 - gmx:100818113 817.379