Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05170 ATGGGCAGGTCACCATGCTGTGAGAAGGTTGGATTGAAGAAAGGGCCCTGGACTCCCGAAGAAGACCAAAAGCTCATGTCCTATATTGAAAAACACGGCCATGGAAGCTGGCGTGCTTTGCCTTCCAAAGCTGGACTCCAAAGATGTGGAAAGAGTTGTCGACTGAGGTGGACTAACTACCTCCGACCAGATATAAAAAGAGGAAAGTTCAGCTTGCAGGAAGAGCAAACCATTATTCAGCTTCATGCCCTTCTTGGAAACAGATGGTCAGCAATAGCGGCTCAGCTTCCCAAGAGGACCGACAACGAGATCAAAAACTACTGGAACACGCACCTAAAGAAGAGGCTAACAAGAATGGGAATAGATCCCACAACCCACAAGCCCAAAACTGATCCCATCGGCGCTGGCTCAGACACCAACTCCGCTTCGCAATCCAAGGACTTGGCCAATCTGAGCCACATGGCGCAGTGGGAGAACGCTCGTCTCGAAGCGGAAGCCAGGTTGGTGAGAGAGTCCAAGCTTCTTCTTCAGGCCCAGCAGACACAACAAACAACCACAACACAACCTCCTCCGGCGCGCCTCGTCCTTAACAAGATCACGGCGGCTCAACAACAGCCCTTGCTTCCGCCCTGCCTTGACGTGCTCAAGGCCTGGCAGAACTCATGGTCTTCCAAGCCGCAGCTTTCCGTACCATCAAGGGAAAATTTCAAGATGCATAGTATGTATGCCATGATGCTCTCCACTGATGAGAATCTTGAATCTCCAACTTCCACCTTGTGCTTTCCTGGAAGTGGAAGTAGCGCCATGCTTCCCATCATGTCCTCCACAACCACCTCCGCCACTACTATCACAGTAGATGCTCTCAACGAAAACTTACTTAATCCTTCTCTCACCAAAACTAAGATTGATAGCAACGGCACCATGGTAACCCCATGTGACGAAGGAGTGTTCATTACGAAAGGAGGTAATAATAATGAAACTGACTCATCATGGTACATGTTGAAACAGAACAACCCTGAAATAGAACTTGATGACGATGAAATAGTGGAAAATAATAATAACAACAATAATAACGGCTTCAGAGATGACGACATCATGGTGGCAGTGGAAGCATTCAGAGGAAGAGGCGGAGGGGCTTACGACGGTGTTAATGTTGTCCCACCAACACTGTCCTCAACCGGCGATGTTGTGGTCATGGAAGCAGGACTCATATGCAGTAGCAATAACAACGGTGATGATGATGCCCACATGCCTTACGATTCCAACGACACCTTGGCAATCATCAATGATGGTGATGGAAGCATCTGTAACGTCAGCCTCGAAGAGAATAAGCATTATTGGAACACCATACTTAACTTGGTCAATGATGCTCAAGTCATGTTCTAA 1386 0.4805 MGRSPCCEKVGLKKGPWTPEEDQKLMSYIEKHGHGSWRALPSKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIAAQLPKRTDNEIKNYWNTHLKKRLTRMGIDPTTHKPKTDPIGAGSDTNSASQSKDLANLSHMAQWENARLEAEARLVRESKLLLQAQQTQQTTTTQPPPARLVLNKITAAQQQPLLPPCLDVLKAWQNSWSSKPQLSVPSRENFKMHSMYAMMLSTDENLESPTSTLCFPGSGSSAMLPIMSSTTTSATTITVDALNENLLNPSLTKTKIDSNGTMVTPCDEGVFITKGGNNNETDSSWYMLKQNNPEIELDDDEIVENNNNNNNNGFRDDDIMVAVEAFRGRGGGAYDGVNVVPPTLSSTGDVVVMEAGLICSSNNNGDDDAHMPYDSNDTLAIINDGDGSICNVSLEENKHYWNTILNLVNDAQVMF 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05170 461 CDD SANT 69 112 IPR001005 -
Arst3g05170 461 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Arst3g05170 461 CDD SANT 16 61 IPR001005 -
Arst3g05170 461 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Arst3g05170 461 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Arst3g05170 461 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst3g05170 461 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Arst3g05170 461 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 226 - -
Arst3g05170 461 Gene3D - 69 116 - -
Arst3g05170 461 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Arst3g05170 461 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Arst3g05170 461 SMART sant 66 114 IPR001005 -
Arst3g05170 461 SMART sant 13 63 IPR001005 -
Arst3g05170 461 FunFam MYB-related transcription factor 13 66 - -
Arst3g05170 461 FunFam MYB transcription factor 68 129 - -
Arst3g05170 461 Gene3D - 13 66 - -
Arst3g05170 461 MobiDBLite consensus disorder prediction 120 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05170 Arst-Chr3 127095792 127097440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05170 1 261 MYB Transcription Factor Family AT3G01140 62.595 2.39e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst3g05170 Myb_DNA-binding 2.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05170 K09422 - gmx:100799222 491.886