Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05139 ATGGCCAAACATTATTATTACAACAATACTGTTCCACCAGCAACATTTTGTGACACCACAGAAGACCCTGCTTATTGCAAAACCCTGCTTGCAAACCAATACGGCAACGGTTATGACTACGGTCGAATTTGCGTCCAAAAATCAGTGTCACAATCACACAGCTTCTTGAATTTAATGGACTCATATCTCCAGGATGGATCATCGTACGATCAAAACACGATTCGAGCCCTGGAAGATTGTAGATTCCTCGCTGAACTAAACTTGGATTTCTTGTACAATACACAAGAGACGGTTAATAAATCCAGCAATGTTCTTCAATCTTCACATGCTGAAGACATTGTGACACAGCTCAGTGCTACTTTGACGAACCAACAAACATGTTTGGATGGTCTTCAAACCACAGCTTCCGATGAAAGAGTGAAGAGTTATCTTTCTTCAATGCTCTCTAATGATACCAAGCTCCATAGCATGTCCTTGTGTTTGTTCAGGAGGGGTTGGGCTCCTGAGAAGAAAATCAAACATTCATGGAAACAAAATGGTCGTTTACCGTATAAGATGCCGAAACGAGTACGTGACATGTATGATTCGGGTAGAGGCCGCCATGGAAACCACGGCCGCCACCACCACCTGAGGAAACTGCTTCAGACGGAAAGCGTAAATGTAAGGGATATGGTGGTTGTTAGCAAGGACGGAAGCGGAAACTTCACCACCATCAACGCAGCCATATCTGCGGCGCCAAATAACACGGCTTCCAGTGATGGCTACTTCCTTGTTTTCATCAAGAAAGGTGTGTATGAAGAGTATGTGTCCATTGCGAAGAACAAGAAACACTTGATGCTAGTTGGAGATGGAATCAACCAGACAATAATCACCGGCGATCGCAATGTTGTCGATGGCTCTACAACGTTCAACTCAGCAACTTTTGCTGTGGTGGGACAAGGTTTTGTAGCAGTGAACATAACATTTCGAAACACAGCAGGGCCAAGCAAGCACCAAGCAGTTGCCCTGAGAAGCGGAGCCGACTTATCAGCTTTCTACATGTGCAGTTTTGAGGGCTATCAAGACACGCTCTACGCCCATTCCATGCGTCAATTCTACAGCGATTGCTACATTTATGGTACCGTTGATTTTATTTTCGGTAACGCTGCGGTAGTCTTCCAAAATTGCAACATTTTTTCCCGCCTCCCTATGACCGGCCAGTTCAACTCAATTACCGCACAAGGCAGAACCGATCCCAACCAAAATACCGGAATCTCCATACACAACGCAACGATTCGAGCCGCTAACGATTTGGCCCCTCGCGTTGGTGTTGTGAAAACGTACCTTGGTAGGCCGTGGAAGCAATACTCTAGGACAGTTTTCATGGAATCTTTTATGGATGGTTTTGTTGATCCTGCTGGGTGGCATGATTGGAGTGGAAGTTTTGCGCTGAATACTTTGTATTACGCGGAGCATAAGAATGCGGGAAGTGGTTCAAGCACTGCAAGTCGAGTTTCGTGGCCTGGTTATCATGTTATTGGGGCAATGGATGCGGCTAATTTCACTGTGTCTAATTTCTTGCAGGGGGATAGCTGGTTGCCTCAAACGGGTGTTCCATTCTTGAATGGGTTAATATAA 1617 0.4533 MAKHYYYNNTVPPATFCDTTEDPAYCKTLLANQYGNGYDYGRICVQKSVSQSHSFLNLMDSYLQDGSSYDQNTIRALEDCRFLAELNLDFLYNTQETVNKSSNVLQSSHAEDIVTQLSATLTNQQTCLDGLQTTASDERVKSYLSSMLSNDTKLHSMSLCLFRRGWAPEKKIKHSWKQNGRLPYKMPKRVRDMYDSGRGRHGNHGRHHHLRKLLQTESVNVRDMVVVSKDGSGNFTTINAAISAAPNNTASSDGYFLVFIKKGVYEEYVSIAKNKKHLMLVGDGINQTIITGDRNVVDGSTTFNSATFAVVGQGFVAVNITFRNTAGPSKHQAVALRSGADLSAFYMCSFEGYQDTLYAHSMRQFYSDCYIYGTVDFIFGNAAVVFQNCNIFSRLPMTGQFNSITAQGRTDPNQNTGISIHNATIRAANDLAPRVGVVKTYLGRPWKQYSRTVFMESFMDGFVDPAGWHDWSGSFALNTLYYAEHKNAGSGSSTASRVSWPGYHVIGAMDAANFTVSNFLQGDSWLPQTGVPFLNGLI 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05139 538 FunFam Pectinesterase 218 537 - -
Arst3g05139 538 SMART PMEI_2 8 161 IPR006501 GO:0004857
Arst3g05139 538 ProSitePatterns Pectinesterase signature 2. 371 380 IPR033131 -
Arst3g05139 538 Pfam Plant invertase/pectin methylesterase inhibitor 15 159 IPR006501 GO:0004857
Arst3g05139 538 CDD PMEI-like_3 15 167 - -
Arst3g05139 538 Gene3D - 218 537 IPR012334 -
Arst3g05139 538 Pfam Pectinesterase 225 523 IPR000070 GO:0030599|GO:0042545
Arst3g05139 538 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 15 163 IPR035513 -
Arst3g05139 538 FunFam Pectinesterase 14 164 - -
Arst3g05139 538 PANTHER PECTINESTERASE 15 527 - -
Arst3g05139 538 Gene3D Invertase/pectin methylesterase inhibitor family protein 14 164 IPR035513 -
Arst3g05139 538 SUPERFAMILY Pectin lyase-like 223 535 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05139 Arst-Chr3 126710873 126713260 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05139 14 538 Carbohydrate Esterase AT1G02810 54.891 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05139 K01051 - gmx:100813051 755.362