Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05137 ATGACCAACTTCATTGTTGTTGACAACCAAAAGGGTAACATATCAAGGGGAAAGTATTTATTATTCTTCAGTCATAGGACAATCGTCAGTCATGTTGAGAATCCCAGTTTTTCGCTAAATGCTTTTCGATTTAGAACCATCCGTGAGTTACTAAATGCTGAGAAGATCGATGACTCTGCATTGTTTGACATGATTGGTGAAGTAGTTGGTAAAGAAGATCCAAAAGAGTTGATCACCAGCAAAGGAAAGGAGACTAAACGACTGGCTGTTATCTTGGAGGACCTAGAAAACAATAGGATTGGGTGCACTATATTTGGTGAAATGGTTGACCAGCTACTTCGTCACATGCAAGATGGAAGGGTTGAGCCACTAATAGTTGTGGTCCAGTATTTTAAGGCAACCAGATGGAATGGCAAGACATCTGTCCAAAGCCATTTTGACATTTCACAGCTGCACATAGACTCCAACCTTAAAGATGTTGCTGAATTTAGGAGCAGGCTGCTTGGCGGTGAACCATCATCCTCTGTGAGGATTAGTCAAGTTCCATCAAAAACAGCTTGGTCAGGGGTTGAGGAGCTTAAACAAGGTGCTGTGTCAGTGAAAACAATTGAAGAAGTCCTTATCCAACATGAGGAAGGTCCAGCTTGGATTGCTGCAAGTATTGTTGCGATTAATGTTACGAAGGATGATTGGTTCTATAAATCATGTAGAAAATGTCCAAAGAAAGTAGAAACTCCTATTGGAAACAGATATGAATGTGGGAAGTGTGGCCATACACATGGATCTGCAGCCCTAAGGTTCAAAGTCGAGGTGATGGTTTTTGATGGAACCGGTAGCATCCGATTGCTACTATGGGACAAGGAAACAAGTATGCTATGTGGGAAGAGAGCTGAACAGATTATGGAGGACGATGTTATAGTGGGAGATGAATATCCCAAGACACTTGATAACATGATGGAAAAAAGAGTCCTTTTCAAGATAAATATCAAAGAAGCCAACATTAATCAATTTGATCATGTGTACACGGTTATGAAAATCTGTGATGATGAGGATATCATTGACAAAAATCTTCCCAAAGAGTTGTCTACTAATCTTCCGAGTAATGTCAGTGAAGATGGCTGCAACAACTATTTGGAAATTTCAGAAAATGTGGCTAATCTTAAAACTGATTGTGATACTGAGTCTTCTATGGATGTTGTGGAGGAGTGCATCTCATCCCTCAAGTACAAAACACCATCCAAAAATATTACCAATGGATTGAAGAATTTTCCTCTAAGTCTGAATGAAGATGAGGAAGAAGGCCAGCTATCAACCAACAGGTTCAGTAGGAAGATGGGAAAGAGACAGAAATGTGTTAACCTTGATGCAGATATATGA 1377 0.3994 MTNFIVVDNQKGNISRGKYLLFFSHRTIVSHVENPSFSLNAFRFRTIRELLNAEKIDDSALFDMIGEVVGKEDPKELITSKGKETKRLAVILEDLENNRIGCTIFGEMVDQLLRHMQDGRVEPLIVVVQYFKATRWNGKTSVQSHFDISQLHIDSNLKDVAEFRSRLLGGEPSSSVRISQVPSKTAWSGVEELKQGAVSVKTIEEVLIQHEEGPAWIAASIVAINVTKDDWFYKSCRKCPKKVETPIGNRYECGKCGHTHGSAALRFKVEVMVFDGTGSIRLLLWDKETSMLCGKRAEQIMEDDVIVGDEYPKTLDNMMEKRVLFKINIKEANINQFDHVYTVMKICDDEDIIDKNLPKELSTNLPSNVSEDGCNNYLEISENVANLKTDCDTESSMDVVEECISSLKYKTPSKNITNGLKNFPLSLNEDEEEGQLSTNRFSRKMGKRQKCVNLDADI 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05137 458 Gene3D - 38 173 IPR012340 -
Arst3g05137 458 CDD RPA1_DBD_C 200 346 IPR047192 -
Arst3g05137 458 Gene3D - 185 356 IPR012340 -
Arst3g05137 458 SUPERFAMILY Nucleic acid-binding proteins 200 348 IPR012340 -
Arst3g05137 458 CDD RPA1_DBD_B_like 63 167 - -
Arst3g05137 458 SUPERFAMILY Nucleic acid-binding proteins 43 167 IPR012340 -
Arst3g05137 458 Pfam Replication factor-A C terminal domain 223 346 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05137 Arst-Chr3 126679389 126681558 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05137 33 285 Core DNA Replication Machinery Family AT2G06510 24.906 2.21e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05137 - - ahf:112803244 842.417