Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05115 ATGAGTGAGAAAACGATCATGGAGCCTGACCACCATCAAAATGGGATCCGCACCAGACCTAATTTTCCACTCCAACTCTTAGACAATAAGAAAGATGACGGTCGCGGCCGACGGATCCGTATGCCGGCTGCAGCCGCTGCCAGGGTGTTCCAGCTGACGCGGGAGCTTGGCCACAAGTCTGACGGGGAGACCATCGAGTGGCTCCTCCAACAGGCTGAGCCCTCCGTCATCGCGGCCACCGGAACCGGTACTATCCCTGCAAACTTCACTTCCCTCAACATCACGCTTAGAAGCTCAGGATCCACCATCTCTTCCCCCTCTCACTACTTCAGAGGCGCCACCGCCACCGCTACACCGTACCTTAGCCACGCAGCCAGCTTCTCCGCCGCTAGGAGCCGCAGCGAATGGGTGAGGAACGTGGCGGTGGAAGATTATTCTAGAAGAGTCATGTTCTCCGGCAGTGACAATAGTAATAATAATAACAACAACAACTCTGCTGCTGCTGCTACTACTGTCTTGAATTTCAACAACGCTGTTAATGATATTATGCAAAGCAAGCAAGAGGCTCGGGAAGAGCCCTGTAGCGGTGACGGTGGCGGCGGAGGAGATGCTTTGGGGAGGAAGAGAAGGCAAGAGGAGGTGTTCTCACAGCACCAGGGTACTCAGATGATGGGTAGCTACTTGTTACAGTCGAGTTCAGGGTCAATTCCGGCGACTCATGCTTCTATTCCGGCGACTTTTTGGATGATGGGCGGCGGTGGAGTTGGTGGTGGCAGTGGTAATAATGGCGGTGACCCAATTTGGGCAATTCCAACCGTTGGTAACAATAGTAGCATGTATAAAGGGGCTATGTCTGGTGGCAGCGGCGGCAACGGTGCCGGCGGCATTCATTTCATGAATTTTGCTTCTCCAATGGCTCTATTGCAAGCTCAACAACTAGGAGGAGGAGGAGGCGGCGGCGGCAGTGCAGTGCTGAGTGAAAGTAACCTGGGAATGCTTGCAGCTCTTAATGCATACAGGCCTATTATGGCTAACGGCAGCGGCGGCCAACACTCACCCCATGGAGATGGAGGAGATCAAGAAAGTCAACCCTGA 1095 0.5388 MSEKTIMEPDHHQNGIRTRPNFPLQLLDNKKDDGRGRRIRMPAAAAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNITLRSSGSTISSPSHYFRGATATATPYLSHAASFSAARSRSEWVRNVAVEDYSRRVMFSGSDNSNNNNNNNSAAAATTVLNFNNAVNDIMQSKQEAREEPCSGDGGGGGDALGRKRRQEEVFSQHQGTQMMGSYLLQSSSGSIPATHASIPATFWMMGGGGVGGGSGNNGGDPIWAIPTVGNNSSMYKGAMSGGSGGNGAGGIHFMNFASPMALLQAQQLGGGGGGGGSAVLSESNLGMLAALNAYRPIMANGSGGQHSPHGDGGDQESQP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05115 364 MobiDBLite consensus disorder prediction 1 15 - -
Arst3g05115 364 MobiDBLite consensus disorder prediction 1 20 - -
Arst3g05115 364 ProSiteProfiles TCP domain profile. 8 79 IPR017887 -
Arst3g05115 364 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 32 333 IPR005333 GO:0003700
Arst3g05115 364 MobiDBLite consensus disorder prediction 186 219 - -
Arst3g05115 364 MobiDBLite consensus disorder prediction 344 364 - -
Arst3g05115 364 Pfam TCP family transcription factor 34 191 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05115 Arst-Chr3 126487963 126489693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05115 31 312 TCP Transcription Factor Family AT3G47620 43.038 3.45e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Arst3g05115 TCP 9.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05115 - - aip:107633962 518.85