Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05103 ATGGCTTTCTTCCCAGCAAATTTCATGTTACAAACCCCACATCATCATCACCAAGATGAGCATCAACCTCCACCTTCACTCAACTCAATCCTAACTTCATGTGCACCTCAAGAGTACCACCACGGAGCAGGAGGAGGGTATCTAGGGAAGAGATCGATGTCATTCTCAGGGATAGAGGTGGGAGAAGTGGAAGGAAATGGAGGAGAGGAAGAGGTGTCAGATGATGGATCACAAGCAGGGGAGAAGAAGAGGAGGCTGAACATGGAGCAAGTGAAGACACTTGAGAAGAGCTTTGAGTTGGGGAACAAGCTTGAACCAGAGAGGAAAATGCAGCTTGCAAGGGCTCTAGGCCTTCAACCTAGACAGATTGCAATTTGGTTCCAAAACAGAAGGGCCAGATGGAAGACAAAGCAATTGGAGAAGGATTATGATCTTCTTAAGCGCCAGTTTGATGCTGTTAAAGCTGATAATGATGCTCTTCAAGCCCAGAATCACAAGCTTCACACTCAGATAATGGCACTGAAAAGTAGAGAACCAACAGAATCAATAAACCTAAACAAAGAGACAGAGGGATCAAGCAGCAACAGGAGTGACAACAGTTCAGATATCAAGTTGGATATATCAACAAGGACACCTACTACTACTACTACTACTTCAGCCATTGACAGTCCTCTATCCACTCATCAAAACAACAACAATAACAGCAGAACACTGTTTCCATCACCATCAAATAATGCTGCTGCTGCTGCTGCTGCCACTGCCAGGCCAACAGAAGTTGCACAGCTTTTTCAAACCACTCCACATCATCATCATCATCATCATCACATGGTCAAAGAAGAGAGCTTGAGCAACATGTTCTGTGCCATTGATGACCAAACTGGCCTCTGGCCATGGTTAGAGCATCAAAATTTCAATTGA 918 0.4466 MAFFPANFMLQTPHHHHQDEHQPPPSLNSILTSCAPQEYHHGAGGGYLGKRSMSFSGIEVGEVEGNGGEEEVSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAVKADNDALQAQNHKLHTQIMALKSREPTESINLNKETEGSSSNRSDNSSDIKLDISTRTPTTTTTTSAIDSPLSTHQNNNNNSRTLFPSPSNNAAAAAAATARPTEVAQLFQTTPHHHHHHHHMVKEESLSNMFCAIDDQTGLWPWLEHQNFN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05103 305 FunFam Homeobox-leucine zipper protein ATHB-13 74 141 - -
Arst3g05103 305 Gene3D - 74 143 - -
Arst3g05103 305 ProSiteProfiles 'Homeobox' domain profile. 77 137 IPR001356 GO:0003677
Arst3g05103 305 SMART HOX_1 80 141 IPR001356 GO:0003677
Arst3g05103 305 Pfam Homeodomain 82 135 IPR001356 GO:0003677
Arst3g05103 305 SUPERFAMILY Homeodomain-like 72 139 IPR009057 -
Arst3g05103 305 Coils Coil 129 177 - -
Arst3g05103 305 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 64 269 IPR045224 GO:0003700
Arst3g05103 305 CDD homeodomain 82 138 IPR001356 GO:0003677
Arst3g05103 305 PRINTS Lambda-repressor HTH signature 117 133 IPR000047 GO:0003677
Arst3g05103 305 PRINTS Lambda-repressor HTH signature 108 117 IPR000047 GO:0003677
Arst3g05103 305 Pfam Homeobox associated leucine zipper 137 177 IPR003106 GO:0006355|GO:0043565
Arst3g05103 305 ProSitePatterns 'Homeobox' domain signature. 112 135 IPR017970 GO:0000981|GO:0006355
Arst3g05103 305 MobiDBLite consensus disorder prediction 63 86 - -
Arst3g05103 305 MobiDBLite consensus disorder prediction 173 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05103 Arst-Chr3 126328961 126330605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05103 1 305 Homeobox Transcription Factor Family AT1G69780 57.878 4.09e-109 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst3g05103 Homeodomain 1.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05103 K09338 - gmx:100790840 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05103 3 126328961 126330605 Arst3g05103 3 126328961 126330605 ECH