Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05090 ATGATGGGAAGACAAAGTGCTAGAAAGTGGATTAGAAACTTAATTCTGGGCAAGAAATCATCATCGAAGTCTAATTCATCAAAACCCCAAGATGTTCTTAAACCTTCAAGTAACAAGGATATGGTGATGGTGGTGGTGTCTTCTGAGGCATCAATGTCTCCTCATCCAGCCCCTCCAAGTTCTTCAGCTAAAGCCATAACAAAAGGAATGGTACCAGAAAATGAGGTAGTTAATGGATCATCAAATGAAAAGCTTTTTGTTATTGCAAGTGAAGATGAACAGGCCAATGCAGAAGTACAAGATGCTGTTGCTAATATTGGATCTGAGGATCATGCTGAGAAAATCAACCTTACAGAGGCAGCTATAATAGCTCAAGCAGCTCTTAGAGGCTATCAGGCACGCAGAAAGTTTGAGATACTGAAAGGGATGATACCCCTTCAAGCTCTTATTCGTGGCAAGTTGGCTCGAAGAGAAGCTGTTTCTGCTCTATACTGTGTTAAGGGAATAGTTAAAGTTCAAGCACTCGCTCGTGGTTATAAAGTTAGGCACTCTGCTATTGGTCTTCAAGTGCAGAAAACTCTTAAGGATACTAAATGTTCAAATTCCATTGGGAGAGTTACATCAACAAAGGCAGAGAAGATTTCAGATAGTGTCTTTGTTCACAAGCTTCTGGCATCGTCGCCGGCGGCTGTGCTTTCCAGACAACTCAGATATGAATGGCTTGAACGTTGGACGAGATCACAATTTTGGGCACCTCTTCAAGAATTGAAGAAAATTGATGAGAAAAATGTTTTAGGCCAAAAAGTAGAAGCTGGTGAGGGAAAAGCCAAAAGAAATGCAAGGAAAGGAGAAGCTGTGAGGGTTGACAAGAAAAAGGAATCAAGCATGGCATTGCATTCATCAGTTAAGGAAAATGAGAAAAGAAAACAACACATGACAAGAATTGAGGATAATAATCATAGTAGTTTCCAGAGAAGAGCTTCACTTCCTGCTAATTATTTGAAGAATGATAAGAATAAGAATGAGTCATCACAAAACACTACTACTACTACTACTACTACTCCAAGAGTTCCAAGTTATATGGCTCCTACTGAGTCTGCAAAAGCTAAGCTAAACTCTCCAAGATTTGGTAGTGATTTGGTATTAGACAGAAATGGTATAAGCAGGAGGCTGTCACTTTCATTTTCACTTAATGGCAAGTTAGGAATGGCAAAGGTAGATAACAGATCCCTCTCATCTTCAAGGGATTGGACAGTTTCAGATAAGTTGATCCAACCTCAGTGGAGAAGGTGA 1293 0.3998 MMGRQSARKWIRNLILGKKSSSKSNSSKPQDVLKPSSNKDMVMVVVSSEASMSPHPAPPSSSAKAITKGMVPENEVVNGSSNEKLFVIASEDEQANAEVQDAVANIGSEDHAEKINLTEAAIIAQAALRGYQARRKFEILKGMIPLQALIRGKLARREAVSALYCVKGIVKVQALARGYKVRHSAIGLQVQKTLKDTKCSNSIGRVTSTKAEKISDSVFVHKLLASSPAAVLSRQLRYEWLERWTRSQFWAPLQELKKIDEKNVLGQKVEAGEGKAKRNARKGEAVRVDKKKESSMALHSSVKENEKRKQHMTRIEDNNHSSFQRRASLPANYLKNDKNKNESSQNTTTTTTTTPRVPSYMAPTESAKAKLNSPRFGSDLVLDRNGISRRLSLSFSLNGKLGMAKVDNRSLSSSRDWTVSDKLIQPQWRR 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05090 430 MobiDBLite consensus disorder prediction 322 360 - -
Arst3g05090 430 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Arst3g05090 430 MobiDBLite consensus disorder prediction 272 371 - -
Arst3g05090 430 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Arst3g05090 430 MobiDBLite consensus disorder prediction 1 39 - -
Arst3g05090 430 Gene3D - 114 164 - -
Arst3g05090 430 Pfam Protein of unknown function (DUF4005) 340 400 IPR025064 -
Arst3g05090 430 PANTHER IQ-DOMAIN 5-RELATED 2 396 - -
Arst3g05090 430 MobiDBLite consensus disorder prediction 17 34 - -
Arst3g05090 430 SMART iq_5 139 160 IPR000048 GO:0005515
Arst3g05090 430 SMART iq_5 116 138 IPR000048 GO:0005515
Arst3g05090 430 SMART iq_5 164 186 IPR000048 GO:0005515
Arst3g05090 430 MobiDBLite consensus disorder prediction 272 321 - -
Arst3g05090 430 ProSiteProfiles IQ motif profile. 167 193 IPR000048 GO:0005515
Arst3g05090 430 Pfam IQ calmodulin-binding motif 167 183 IPR000048 GO:0005515
Arst3g05090 430 Pfam IQ calmodulin-binding motif 118 137 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05090 Arst-Chr3 126213895 126216730 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05090 90 308 IQD Protein Family AT1G18840 42.149 8.47e-37 140
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05090 3 126213895 126216730 Arst3g05090 3 126213895 126216730 ECH
Arst3g05090 3 126213895 126216730 Arst1g04264 1 105182574 105188515 ECH
Arst3g05090 3 126213895 126216730 Arst1g04264 1 105182574 105188515 PCT