Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05089 ATGATGGGAAGACAAAGTGCTAGAAAGTGGATTAGAAACTTAATTCTGGGCAAGAAATCATCATCGAAGTCTAATTCATCAAAACCCCAAGATGTTCTTAAACCTTCAAGTAACAAGGATATGGTGATGGTGGTGGTGTCTTCTGAGGCATCAATGTCTCCTCATCCAGCCCCTCCAAGTTCTTCAGCTAAAGCCATAACAAAAGGAATGGTACCAGAAAATGAGGTAGTTAATGGATCATCAAATGAAAAGCTTTTTGTTATTGCAAGTGAAGATGAACAGGCCAATGCAGAAGTACAAGATGCTGTTGCTAATATTGGATCTGAGGATCATGCTGAGAAAATCAACCTTACAGAGGCAGCTATAATAGCTCAAGCAGCTCTTAGAGGCTATCAGGCACGCAGAAAGTTTGAGATACTGAAAGGGATGATACCCCTTCAAGCTCTTATTCGTGGCAAGTTGGCTCGAAGAGAAGCTGTTTCTGCTCTATACTGTGTTAAGGGAATAGTTAAAGTTCAAGCACTCGCTCGTGGTTATAAAGTTAGGCACTCTGCTATTGGTCTTCAAGTGCAGAAAACTCTTAAGGATACTAAATGTTCAAATTCCATTGGGAGAGTTACATCAACAAAGGCAGAGAAGATTTCAGATAGTGTCTTTGTTCACAAGCTTCTGGCATCGTCGCCGGCGGCTGTGCTTTCCAGACAACTCAGATATGAATGGCTTGAACGTTGGACGAGATCACAATTTTGGGCACCTCTTCAAGAATTGAAGAAAATTGATGAGAAAAATGTTTTAGGCCAAAAAGTAGAAGCTGGTGAGGGAAAAGCCAAAAGAAATGCAAGGAAAGGAGAAGCTGTGAGGGTTGACAAGAAAAAGGAATCAAGCATGGCATTGCATTCATCAGTTAAGGAAAATGAGAAAAGAAAACAACACATGACAAGAATTGAGGATAATAATCATAGTAGTTTCCAGAGAAGAGCTTCACTTCCTGCTAATTATTTGAAGAATGATAAGAATAAGAATGAGTCATCACAAAACACTACTACTACTACTACTACTACTCCAAGAGTTCCAAGTTATATGGCTCCTACTGAGTCTGCAAAAGCTAAGCTAAACTCTCCAAGATTTGGTAGTGATTTGGTATTAGACAGAAATGGTATAAGCAGGAGGCTGTCACTTTCATTTTCACTTAATGGCAAGTTAGGAATGGCAAAGGTAGATAACAGATCCCTCTCATCTTCAAGGGATTGGACAGTTTCAGATAAGTTGATCCAACCTCAGTGGAGAAGGTGA 1293 0.3998 MMGRQSARKWIRNLILGKKSSSKSNSSKPQDVLKPSSNKDMVMVVVSSEASMSPHPAPPSSSAKAITKGMVPENEVVNGSSNEKLFVIASEDEQANAEVQDAVANIGSEDHAEKINLTEAAIIAQAALRGYQARRKFEILKGMIPLQALIRGKLARREAVSALYCVKGIVKVQALARGYKVRHSAIGLQVQKTLKDTKCSNSIGRVTSTKAEKISDSVFVHKLLASSPAAVLSRQLRYEWLERWTRSQFWAPLQELKKIDEKNVLGQKVEAGEGKAKRNARKGEAVRVDKKKESSMALHSSVKENEKRKQHMTRIEDNNHSSFQRRASLPANYLKNDKNKNESSQNTTTTTTTTPRVPSYMAPTESAKAKLNSPRFGSDLVLDRNGISRRLSLSFSLNGKLGMAKVDNRSLSSSRDWTVSDKLIQPQWRR 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05089 430 MobiDBLite consensus disorder prediction 322 360 - -
Arst3g05089 430 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Arst3g05089 430 MobiDBLite consensus disorder prediction 272 371 - -
Arst3g05089 430 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Arst3g05089 430 MobiDBLite consensus disorder prediction 1 39 - -
Arst3g05089 430 Gene3D - 114 164 - -
Arst3g05089 430 Pfam Protein of unknown function (DUF4005) 340 400 IPR025064 -
Arst3g05089 430 PANTHER IQ-DOMAIN 5-RELATED 2 396 - -
Arst3g05089 430 MobiDBLite consensus disorder prediction 17 34 - -
Arst3g05089 430 SMART iq_5 139 160 IPR000048 GO:0005515
Arst3g05089 430 SMART iq_5 116 138 IPR000048 GO:0005515
Arst3g05089 430 SMART iq_5 164 186 IPR000048 GO:0005515
Arst3g05089 430 MobiDBLite consensus disorder prediction 272 321 - -
Arst3g05089 430 ProSiteProfiles IQ motif profile. 167 193 IPR000048 GO:0005515
Arst3g05089 430 Pfam IQ calmodulin-binding motif 167 183 IPR000048 GO:0005515
Arst3g05089 430 Pfam IQ calmodulin-binding motif 118 137 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05089 Arst-Chr3 126213728 126216730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05089 90 308 IQD Protein Family AT1G18840 42.149 8.47e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05089 - - aip:107634789 761.14