Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05088 ATGAAGAGATCATTGGTTTTGTTCTGTAACTTGTTTCCTGCAACAATCCTTCTTGTTCTGCTTACTATAACAAGAAGTACTTCTGCACAGCTTGTAAGCAGTGAGAACAGAATCCTCTTCCAAGTTCAGAAGCTTCTAGAATATCCACAAGCCCTTCAAGGATGGAATAACTGGACCAACTTCTGCTACCTCCCTCCATCACCTTCCCTCACCATAGTCTGCACAAATGGCCATGTCACAGAACTCACCATCATTGGAAACAACACTAGTTCTCATCAAATCCTTTCATCAAGGTTCTCCATTGATTCTCTCTTCACTGTGATGACAAAGTTTTCAAATTTGAAGGCCTTATCATTGGTTTCATTAGGTCTGTGGGGTCCATTACCTTCCAAGATCAACAGGTTCTGGTCACTGGAGGTTCTCAACATTAGTTCAAACTTCATTTATGGTGAAATTCCACCATCAATATCAACATTGAAGAGCCTCAAGAGTCTTGTTTTGGCTGATAATCTCTTCAATGGAACTGTCCCAGATTTCAAAAAGCTAACTTTTCTTCAAGAGCTTAACTTGGGTGGCAACAAGCTTGGTCCTTATTTTCCTTCACTATTAGGCCAGAACCTTGTGAGTCTTATCTTGAGGAACAATTCTCTCAGATCTCAAATTCCTCTTCAATTCATAAAATTTGATAAGCTTCAGACACTTGACATCTCTTCCAATGAAATCTTTGGAAAGATTCCATCTTTTCTTTTCTCTTTGCGTTCTCTCCAGTACCTAAACTTGGCTGCAAACCAATTAAGTGGTAACCTTTCGGCAAAAACAGCATGTGGTTCTGCACTGACATTTGTGGATATCTCACACAATCTTCTAGTTGGAAAGTTGCCATCATGCATTGGTTCAATGATTTCAAAGGGCAAGCTGCTATACTCTGGGAATTGTTTTTCAACAAGAAGGTTGAATGACCAGCAGCATCCATATTCATTTTGCAAGAAAGAGGTTGCCTTAGCCGTTAAGCCACCGGAGAAAACAAAGAAGGAGAATGAATCCAGAGTGAAACTAAGTCTATTACTTGGTATAATTGGAGGTGCTGTGGGAATTGCAGCAATTCTGGTTCTACTCACTGTGTTCATTGTGAGGAAATCCAACCAAGAAAGATCATATCGTCACCGGGACAGATCCGTTGCTGATAAATTTTATGCCGGAGCATCTCCCGGACCAAACACTGATACAAGACGTGTTCCTCAGACGATGAGGCTATCTGCGGTTGGAATGCCACCATACTGTAATTTCACATCAGAAGAAATTGAAGATGCAACAAACAACTTTGACTCAACAAATCTAATAGGAGAAGGAACACAGGGCCAACTATATAGAGGTTGGCTCAGAGATGGTGCAGTGGTCCTGGTTAACTGTGTAAAAATAAAGCAGAAGGGTTTGCCCCACACCATTAACCAGAACTTAGAGGTTTTGCCTAATTTGAGGCACAGGCATTTGATGAGTGTTCTAGGACACTGTGTCATTACTCATCAGGAAAATCCTCAACCAACAAGCACAGTCTTCATTGTCTTTGAACACATATCAAATGTGTCGCTTAGGGATCAACTTACAGATTGGAGAAAGAGAGATATGCTGAAATGGCCACAAAGAATGGCAATCAGCATAGGCATTGCAAGAGGGGTGCAGTTCTTGCACACAGGAGTTGCTCCTGGCATTTTCGGCAACAATTTGAAGATTGAGAACATTCTATTGGATGATAGCCTCAATGCAAAAGTTAGTAGATACAGCATTCCATTGCCATCCAAGAACACTGACCAAAATGCCCCCAATCAGATTGGCAGCACAAATAATGCAGAAAAGGAAGATATCTATCAGTTGGGTGTTATTCTTCTTGAAATTATCACTGGCAAACAAATTAAATCTTCCAGTGAAATAGAGGAGCTGAAGGATGAGCTGGAGAAAGGGTCATCAGAAGCACAGTCAGTACTAAGGAGTGCAGTTGATCCTTGCCTGAGGGGAACTTATGCATATGAATCAATGAGGACTGCAGTTCAGATCACTATCAATTGTCTCTCCAAGGCTGCTAGTAAGCGCCCTTCAATCGAGGATGTTCTGTGGAACTTGCAGTACTCGATGCAAGTTCAAGAGTCCTGGACCAGCAGTGGAAATCTCAGCACAAAGTTCTGA 2181 0.4154 MKRSLVLFCNLFPATILLVLLTITRSTSAQLVSSENRILFQVQKLLEYPQALQGWNNWTNFCYLPPSPSLTIVCTNGHVTELTIIGNNTSSHQILSSRFSIDSLFTVMTKFSNLKALSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPPSISTLKSLKSLVLADNLFNGTVPDFKKLTFLQELNLGGNKLGPYFPSLLGQNLVSLILRNNSLRSQIPLQFIKFDKLQTLDISSNEIFGKIPSFLFSLRSLQYLNLAANQLSGNLSAKTACGSALTFVDISHNLLVGKLPSCIGSMISKGKLLYSGNCFSTRRLNDQQHPYSFCKKEVALAVKPPEKTKKENESRVKLSLLLGIIGGAVGIAAILVLLTVFIVRKSNQERSYRHRDRSVADKFYAGASPGPNTDTRRVPQTMRLSAVGMPPYCNFTSEEIEDATNNFDSTNLIGEGTQGQLYRGWLRDGAVVLVNCVKIKQKGLPHTINQNLEVLPNLRHRHLMSVLGHCVITHQENPQPTSTVFIVFEHISNVSLRDQLTDWRKRDMLKWPQRMAISIGIARGVQFLHTGVAPGIFGNNLKIENILLDDSLNAKVSRYSIPLPSKNTDQNAPNQIGSTNNAEKEDIYQLGVILLEIITGKQIKSSSEIEELKDELEKGSSEAQSVLRSAVDPCLRGTYAYESMRTAVQITINCLSKAASKRPSIEDVLWNLQYSMQVQESWTSSGNLSTKF 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05088 726 Gene3D Transferase(Phosphotransferase) domain 1 525 721 - -
Arst3g05088 726 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 525 722 - -
Arst3g05088 726 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 203 293 - -
Arst3g05088 726 Gene3D Phosphorylase Kinase; domain 1 406 511 - -
Arst3g05088 726 Pfam Protein kinase domain 443 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05088 726 ProSiteProfiles Protein kinase domain profile. 441 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05088 726 Pfam Leucine rich repeat 206 265 IPR001611 GO:0005515
Arst3g05088 726 SUPERFAMILY L domain-like 55 312 - -
Arst3g05088 726 SUPERFAMILY Protein kinase-like (PK-like) 419 706 IPR011009 -
Arst3g05088 726 Pfam Leucine Rich Repeat 137 158 IPR001611 GO:0005515
Arst3g05088 726 Gene3D Ribonuclease Inhibitor 32 329 IPR032675 -
Arst3g05088 726 Coils Coil 643 663 - -
Arst3g05088 726 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 32 202 - -
Arst3g05088 726 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 79 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05088 Arst-Chr3 126201669 126205293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05088 27 647 Miscellaneous Gene Families AT2G02780 51.084 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Arst3g05088 Pkinase 7.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05088 - - gmx:100789785 1048.5