Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05085 ATGGGAAAATTGGAAGTATTATTGAGAAATGGTGCAAATGACGAAGATTCATCATCATCATCATCATCATTAGTGCAAAAGGAGTACTTGTTTGACATTATCTTTCAACAACAAAAGCAAGAAGCTACCACCAAAGAAGGCATCAATAATAATAATGAAGATAGTGATGAAGAACTTGTGTCACTCTCTCTAGGAGTCTCATCATCAGAAAAACTACTCACCGAGATGTGGCCACCGAGTAAAGTTCTCAAGACAACAAAAAATAATGGCGAAGGAAATGAAGCATCTCATCATCATTACCATAATACTCGCCTCAAGAAGGCTAGGGTTTCTATAAGAGCCAGATGTGATACACAAACGATGAATGATGGATGCCAATGGAGAAAATATGGACAGAAGATAGCAAAAGGAAATCCATGTCCTCGTTCATACTACCGATGCACTGTCTCTTCATCTTGTCCCGTAAGAAAACAGGTTCAAAGATGTGCTCAAGACATGTCAATCCTGATTACAACCTATGAAGGAACTCACAACCATCCACTTCCTTCTTCAGCCACTCCAATGGCGTCTGCAACTTCAGCCGCCGCTTCCGTTCTTCGATCCTCGTCCTTGTCCTCCTCCTCATCGCAACAAGGCATTGTACCCAATTCAGAAACAACCACCATTGTCAACCCTAATAATAATAATAATACTACCCTAATAAGACCACAACAATTCTACTTGTTCAACTCTTCCATGATCTCAACCTCCAATAATAACTTTCACCCCACAATAACTCTTGACCTCATTACTAAACCTCCAACTTCATCATCATCTTCCATACCAAAGTATTCACCAACAAATCTTGATTTTTCCTCAACTACTACCACTTTCTCTCCATTGCAGTATAGCACTCAACACTCATCATCGTCTCGTTATTATTGGAACCTTAATAAGAATGGAAAGCAACCATTGATTCAATATCATCAAGGCCATTATCCCTACCAACAAAATTGCATGCCCATTATTTTTCAAAAACCTTTACATGCAGATTGTTATGCTTCCTCTGCTCTTAATAATAACCAACAAGGAAACATCACAAAATCATTGTTAACCTCACAACCGTCTAAAGGTTCATATGCTTCGCCGCCCTCTAAGAAAAGTTACCAGTTCTTGGAGAAAAGGAAGTGA 1170 0.3915 MGKLEVLLRNGANDEDSSSSSSSLVQKEYLFDIIFQQQKQEATTKEGINNNNEDSDEELVSLSLGVSSSEKLLTEMWPPSKVLKTTKNNGEGNEASHHHYHNTRLKKARVSIRARCDTQTMNDGCQWRKYGQKIAKGNPCPRSYYRCTVSSSCPVRKQVQRCAQDMSILITTYEGTHNHPLPSSATPMASATSAAASVLRSSSLSSSSSQQGIVPNSETTTIVNPNNNNNTTLIRPQQFYLFNSSMISTSNNNFHPTITLDLITKPPTSSSSSIPKYSPTNLDFSSTTTTFSPLQYSTQHSSSSRYYWNLNKNGKQPLIQYHQGHYPYQQNCMPIIFQKPLHADCYASSALNNNQQGNITKSLLTSQPSKGSYASPPSKKSYQFLEKRK 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05085 389 MobiDBLite consensus disorder prediction 365 379 - -
Arst3g05085 389 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 39 347 IPR044810 GO:0003700
Arst3g05085 389 SMART WRKY_cls 121 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g05085 389 FunFam probable WRKY transcription factor 31 106 183 - -
Arst3g05085 389 Pfam WRKY DNA -binding domain 122 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g05085 389 Gene3D WRKY domain 106 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst3g05085 389 ProSiteProfiles WRKY domain profile. 116 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g05085 389 SUPERFAMILY WRKY DNA-binding domain 114 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst3g05085 389 MobiDBLite consensus disorder prediction 365 389 - -
Arst3g05085 389 MobiDBLite consensus disorder prediction 203 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05085 Arst-Chr3 126176281 126178593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05085 21 262 WRKY Transcription Factor Family AT5G15130 48.413 5.71e-58 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst3g05085 WRKY 1.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05085 - - aip:107633968 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05085 3 126176281 126178593 Arst3g05085 3 126176281 126178593 ECH
Arst3g05085 3 126176281 126178593 Arst1g04273 1 105243670 105249856 ECH
Arst3g05085 3 126176281 126178593 Arst4g03674 4 115651430 115653923 ECH
Arst3g05085 3 126176281 126178593 Arst1g04273 1 105243670 105249856 PCT
Arst1g03827 1 99439363 99442116 Arst3g05085 3 126176281 126178593 PCT