Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05060 ATGGGTGTTAGTTCAGATTTTGGAAGTGTTTTCATGGAAATGCTGAACTGCAATGTGTGTACCAAAAATGCTTCACTCTATGTGTGGTCTGCATGTTTCTTTGAGTTGAAAGGGAGGCTCCATGATGCCCTCACAATCTATCACCTTGGTATTTCCAGGAATGCAGAGCCAATTGAGTGGTTGAAGAAGGCACAGGCATTATGTCACCAGAGAATATCTGAAACTTGGAAGGCGTCTGAAAGGCAGAAGATTGATTATAAGGGATCCACAGAGTTGGGAAACATTGGCATTAATCCATGGGATTCCTCCATTTTGGAAGACCTGATGAAGAAGATAAATCCTACAATTAAAAAATTTTATGGGTATCACTTGAGCACTAAATCTTATACAGGGAAAGTGGCCTTATCTACTTTGAAGAATGCATCAAGGAACAAAGTTATAGAGATAGGCGGGAGGAAGTACCATATCAAAGGTTGCGCTGGACAAGGTGGTTTTGCTCAAGTATACAAGGCCTTTGTCAACAGTGATCCAAATGATGTTGTTGCGCTAAAGATACAAAAGCCAGCTTTCCCTTGGGAATTTTACATGTATCGTCAGCTTGATATGCGGATCACTGGCAGAGAAAGGTCAAGCTATGGTTTGGCTCAGAGAATTCATCTGTATGCAGACTGTAGCATACTCATCTGTGACTATTTAGCTCATGGAACGCTACAGGATGTCATAAACAGATATGCGGTCCAAGGGAAACCCATGGAAGAAGTTTTATGTATTTATTACACGATAGAAATGTTACACATGGTTGAAACTTTGCATGATGTTGGCTTGATTCATGGTGATTTCAAGCCTGATAATCTGCTTATTCGCTATGCTAGGGATGACCTTACAGAAGAAGGGTTCTTGGACCGAAGTGGTCCTTGGTGTGATCAGACTGGGGAAGAGGGATTGTTCTGGATCTCTTTCCAGATGACATAG 972 0.4156 MGVSSDFGSVFMEMLNCNVCTKNASLYVWSACFFELKGRLHDALTIYHLGISRNAEPIEWLKKAQALCHQRISETWKASERQKIDYKGSTELGNIGINPWDSSILEDLMKKINPTIKKFYGYHLSTKSYTGKVALSTLKNASRNKVIEIGGRKYHIKGCAGQGGFAQVYKAFVNSDPNDVVALKIQKPAFPWEFYMYRQLDMRITGRERSSYGLAQRIHLYADCSILICDYLAHGTLQDVINRYAVQGKPMEEVLCIYYTIEMLHMVETLHDVGLIHGDFKPDNLLIRYARDDLTEEGFLDRSGPWCDQTGEEGLFWISFQMT 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05060 323 Pfam Protein kinase domain 154 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05060 323 ProSiteProfiles Protein kinase domain profile. 154 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05060 323 SMART serkin_6 154 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05060 323 ProSiteProfiles BUB1 N-terminal domain profile. 1 92 IPR013212 -
Arst3g05060 323 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Arst3g05060 323 SUPERFAMILY Protein kinase-like (PK-like) 151 290 IPR011009 -
Arst3g05060 323 Gene3D Transferase(Phosphotransferase) domain 1 152 322 - -
Arst3g05060 323 Gene3D - 1 87 - -
Arst3g05060 323 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 4 82 IPR015661 GO:0007094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05060 Arst-Chr3 125961998 125965605 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05060 148 287 MAP Kinase Kinase Kinase Kinase AT1G53165 28.873 4.19e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Arst3g05060 Pkinase 2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05060 K02178 - gmx:100802272 487.648