Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05031 ATGGATCCGGGTGCGATGATGAACGAGGGCTCGTTTGGGAATGGGGGAGGCAATACGGTGCCGTTTAGCTTGGCGGAGATCTGGCCGTTTCCGCAGGCCGTCAACGCTGCTGGAGGCGGCGCCTTGGGGCTCAGGAGGCCGCAGTTTGGCTTGGGACAGTTTGGGGATTTCATTGCCGGTCCCAACCGGGAACCTGGAGCGGTTGCTTCAGAACAGAAGGCGGCCAGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGGTAGTAGGAAGAGGCGTGAATCAGAGGAGGAATCCCCTAAGGGTGTTTCCACCAGCAATGTTGCACCTAATGCCGTGGTAATTTTCATTATTGCCTCTGTTTATCCAATTACTACAACTAATTTACTGTTTAGTTCAGGAAAGCCTGCGGACCAAAATAATCAGACACCACCACCTGACCCTCCTAGGCAAGATTACATCCACGTCCGAGCCAGAAGGGGTCAAGCTACTGATAGCCACAGTCTTGCTGAAAGAGCTAGAAGGGAAAAGATTAGTGAAAGGATGAAAATTCTTCAGGATTTGGTCCCTGGTTGTAATAAGGTTATTGGAAAAGCATTGGTCCTTGATGAGATAATTAATTATATCCAATCCCTTCAGCGTCAAGTTGAGTTTTTGTCAATGAAGCTTGAAGCAGTGAATTCAAGACTGAACACTGGCATTGAAGCTTTTCCTCCTAAAGATTTTGGTCAGCAAACATTTGATCCGGCGAGCTTGCCATTTGGTTCTCAGGCTACTAGAGACTATAGCAGAGGTTCTTCCCCAGAGTGGTTACATATGCAGGTAGGAGGTGCTTTCGAAAGAGCAACGTAG 846 0.4976 MDPGAMMNEGSFGNGGGNTVPFSLAEIWPFPQAVNAAGGGALGLRRPQFGLGQFGDFIAGPNREPGAVASEQKAASGGGGGGGGGGSRKRRESEEESPKGVSTSNVAPNAVVIFIIASVYPITTTNLLFSSGKPADQNNQTPPPDPPRQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEAFPPKDFGQQTFDPASLPFGSQATRDYSRGSSPEWLHMQVGGAFERAT 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05031 281 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 160 210 IPR011598 GO:0046983
Arst3g05031 281 Pfam Helix-loop-helix DNA-binding domain 164 211 IPR011598 GO:0046983
Arst3g05031 281 FunFam Basic helix-loop-helix transcription factor 157 229 - -
Arst3g05031 281 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 158 227 IPR036638 GO:0046983
Arst3g05031 281 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 86 251 IPR024097 GO:0006355
Arst3g05031 281 CDD bHLH_AtBPE_like 150 235 - -
Arst3g05031 281 SMART finulus 166 216 IPR011598 GO:0046983
Arst3g05031 281 Gene3D - 157 233 IPR036638 GO:0046983
Arst3g05031 281 MobiDBLite consensus disorder prediction 131 150 - -
Arst3g05031 281 Coils Coil 207 227 - -
Arst3g05031 281 MobiDBLite consensus disorder prediction 62 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05031 Arst-Chr3 125785614 125788301 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05031 1 239 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 55.785 1.62e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst3g05031 HLH 2.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05031 - - gmx:100784478 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05031 3 125785614 125788301 Arst3g05031 3 125785614 125788301 ECH