Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05028 ATGATGAAGGGATTGGGTGGGATTGATTCTCAACCAGGTTCTTCTTTCTCGCGAACGAGTTCCAAGATGCACCAGCGACCCCCCTCTCAGACCATTCGACTCGGCCGGGTCCAGCCACAGGCACCTTCCTACCGCACCATTTTCTGCAATGATCGTGAATCCAATTTCCCCGTTCGCTTCAAGGGAAATTCAATATCTACTACAAAATACAACGTTTTAACCTTTTTACCAAAAGGATTATTTGAACAGTTCAGACGGGTGGCTAATCTCTACTTTCTTTCAATCTCAATTTTGTCAACCACACCAATTAGTCCCGTCTCTCCAATTACCAATGTACTTCCTCTATCCTTGGTTCTTCTTGCATCTCTTATTAAGGAAGCTTGGGAGGACTGGAAGCGCTTTCAAAATGACATGGCCATAAACAATAAAATGGTAGACGTTTTGCAAGATCAACGGTGGGTTTCTGTACCCTGGAAAGCGTTGCAGGTTGGAGACATTGTCAAGGTTAAGCAGGATGAATTCTTTCCAGCAGATCTGCTTTTCATGGCTAGTACAAATGCAGATGGTGTTTGCTACATTGAGACTGCTAATTTGGACGGGGAAACCAACTTGAAGATAAGGAAAGCATTGGAAAAGACTTGGGATTACCTGACTCCACCGAAAGCATCTGAGTTTAAAGGTGAAATTCAATGTGAACAACCAAACAATTCGCTGTATACCTTTACTGGAAATCTTATATTGGACAATCAAACATTGCCTCTCAGTCCAAATCAAGTTTTGCTGCGAGGATGCAGTCTCAGGAATACGGAGTATATTGTTACGGTGGTTATTTTTACAGGACATGAAACAAAGGTGATGATGAATTCAATGAACGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAACTTGACAAGCTCATACTCACTCTATTTGTAACTCTCTTTGTGATGTGCTTTGTTGGAGCCACGGGCAGTGCACTCTTCGTAGACAAGAAATATTATTACTTGCATCTTGATTCAATTGAGGAGGGATCATCACAGTTTAACCCTAACAACAGATTTTTGGTTCTTATTCTGACTATGTTTACCCTTATCACACTATACTCTTCAATCATTCCCATTTCTCTTTATGTCTCTATAGAGATGATAAAATTTATCCAGTCTGCTCAGTTTATTAACAAGGACTTGCACATGTATCATAGTGAAACCAATACGCCTGCATTAGCTAGGACGTCAAATCTGAATGAAGAACTTGGGCAGGTGGAATACATTTTTTCTGACAAAACTGGGACTCTTACTAGAAACTTAATGGAATTCTTCAAGTGCTCAATTGGTGGGGAGGTGTATGGACATGGTGTGACAGAAATTGAAAGGGGAATAGCAGAGCGCAATGGCATGAAAATTGAGGAAAAAAGATCACCCAATGCAGTGCAAGAGAAAGGTTTTAATTTTGATGATACTAGGATTATGAGAGGAGCATGGAGGAATGAGTCTAATCCTGATATCTGCAAGGGGTTCTTCAGATGTCTTGCTATATGTCATACAGTACTTCCTGAGGGTGAAGAGTCCCCTGAAAAGATTAAGTATCAAGCTGCGTCTCCTGATGAGTCTGCTTTGGTTATTGCTGCAAAGAACTTTGGTTTCTTTTTCTACAGACGCACACCAACAGCTATATATGTTCGTGAATCTCATGTGGAGAAGATTGGCCATACTCAAGATGTATCCTATGAAATTTTAAATGTACTCGAGTTTAATAGTACAAGGAAGCGTCAGTCCGTTGTATGTCGTTATCCAGATGGGAGGCTTGTATTGTACTGCAAGGGTGCTGATACTGTAATCTTTGAGAGACTGGCTGATGGTAATAATGAAATCAGGAACTTGACAAGAGAGCATCTGGAACAATTTGGATCTGCTGGACTACGCACATTATGCCTGGCCTACAAAGAATTGCATCCTGATGCTTATGAAAGCTGGAATGAGAAGTTTATCCAGGCCAAGTCTTCTTTACGTGATCGTGAGAAGAAGTTAGATGAGGTTGCGGAACTTATTGAAAATGGTCTCACTTTAATTGGTTGCACCGCCATCGAAGACAAGCTTCAGGAGGGAGTACCAGCTTGCATACGGACTCTTCAAAAGGCTGGTATCAAAATTTGGGTTCTTACAGGGGACAAGATTGAAACAGCAATAAACATAGCCTACGCATGCAATTTAATAAACAATGAGATGAAGAAATTTATTATCAGCTCAGAAACTGATGCGATAAGAGAAGTTGAAGAAAAGGGTGACCAAGTGGAAATTGCACGATTTATTAAAGATGAAGTGAAAAAAGAGCTAAAGAAATGCACTGAGGAAGCACAGAGCTATTTTAACACTGGATCTGCACCAAAATTAGCACTTGTAATTGATGGAAAGTGTCTAATGTATGCGTTGGATCCAAGTTTAAGAGTGATGCTGCTGGATTTAGGTTTGAACTGTCATGCTGTCGTTTGCTGCCGAGTTTCTCCTTTACAGAAAGCACAGGTAACAAGTATGGTCAAGAAAGGTGCACATAAAATAACACTTAGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGGTTGGAAGGAATGCAAGCTGTGATGGCTAGTGACTTTGCCATTGCACAGTTCCGTTACTTGGAAGATTTGCTGCTTGTTCATGGCCGCTGGTCATATCTACGTGTATGCAAGGTGGTATTATACTTCTTCTATAAGAATCTCACATTCGCTCTCACTCAGTTTTGGTTTACTTTTCAAACTGGGTTTTCTGGTCAGAGATTCTATGATGATTGGTTTCAGTCATTATATAATGTCATCTTCACAGCAGTACCTGTGGTCATTGTTGGGCTATTTGACAAGGATGTCAGTGCGTCTTTATCCAAGAAGTATCCTGAGCTATACAAGGAGGGAATAAAGAATGCCTTCTTCAAGTGGAGAGTTGTGGCTGTCTATGCCTTTTTTTCTATATACCAGTCTCTAATATTCTTCTATTTTGTGGGCACAACAAACCTGACTGCTAAGAACTCAGATGGAAAGATATTTGGACTCTGGGATGTCAGTACAATGGCATTCACATGTGTTGTAATAACTGTCAACTTGCGACTGCTTTTGATCTGTAATTCAATCACAAGATGGCACTATATTAGTGTCGGTGGAAGTATATTAGCCTGGTTTATTTTTGTTTTTATATACTCGTTGATTTGTCATCTTTTTGGTCGGCAGAATGTTTATTTTGTCATCTTTGTCTTGATGAGTACATTCTATTTCTACTTCATACTACTACTTGTTCCCGTTGCTGCACTCTTCTGTGACTTTGTTTACCAAGGGGTTCAAAGATGGTTCTTCCCCTATGATTTTCAAATTGTTCAAGAAATGCACAAGAATGAGCTTAATGACACCGGTAGGGCAAAATTGCTGGAGGTAGAGAACCAGCTTACGGAAGATCAAGCAAGGAGCTACGCTGTATCTCGGCTCCCACCTGCGATATCAAAGCACACTGGGTTTGCATTCGATTCGCCAGGGTACGAGTCATTCTTTGCTTCACAGATTGGTGTATATGCCCCTCCAAAGGCATGGGATGTTGCAAGACGAGCTAGCATGAAATCACGGCTAAAGATTGTGCTGCAAAAGTGA 3684 0.4083 MMKGLGGIDSQPGSSFSRTSSKMHQRPPSQTIRLGRVQPQAPSYRTIFCNDRESNFPVRFKGNSISTTKYNVLTFLPKGLFEQFRRVANLYFLSISILSTTPISPVSPITNVLPLSLVLLASLIKEAWEDWKRFQNDMAINNKMVDVLQDQRWVSVPWKALQVGDIVKVKQDEFFPADLLFMASTNADGVCYIETANLDGETNLKIRKALEKTWDYLTPPKASEFKGEIQCEQPNNSLYTFTGNLILDNQTLPLSPNQVLLRGCSLRNTEYIVTVVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILTLFVTLFVMCFVGATGSALFVDKKYYYLHLDSIEEGSSQFNPNNRFLVLILTMFTLITLYSSIIPISLYVSIEMIKFIQSAQFINKDLHMYHSETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGHGVTEIERGIAERNGMKIEEKRSPNAVQEKGFNFDDTRIMRGAWRNESNPDICKGFFRCLAICHTVLPEGEESPEKIKYQAASPDESALVIAAKNFGFFFYRRTPTAIYVRESHVEKIGHTQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIFERLADGNNEIRNLTREHLEQFGSAGLRTLCLAYKELHPDAYESWNEKFIQAKSSLRDREKKLDEVAELIENGLTLIGCTAIEDKLQEGVPACIRTLQKAGIKIWVLTGDKIETAINIAYACNLINNEMKKFIISSETDAIREVEEKGDQVEIARFIKDEVKKELKKCTEEAQSYFNTGSAPKLALVIDGKCLMYALDPSLRVMLLDLGLNCHAVVCCRVSPLQKAQVTSMVKKGAHKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLEDLLLVHGRWSYLRVCKVVLYFFYKNLTFALTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTAVPVVIVGLFDKDVSASLSKKYPELYKEGIKNAFFKWRVVAVYAFFSIYQSLIFFYFVGTTNLTAKNSDGKIFGLWDVSTMAFTCVVITVNLRLLLICNSITRWHYISVGGSILAWFIFVFIYSLICHLFGRQNVYFVIFVLMSTFYFYFILLLVPVAALFCDFVYQGVQRWFFPYDFQIVQEMHKNELNDTGRAKLLEVENQLTEDQARSYAVSRLPPAISKHTGFAFDSPGYESFFASQIGVYAPPKAWDVARRASMKSRLKIVLQK 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05028 1227 FunFam Phospholipid-transporting ATPase 689 896 - -
Arst3g05028 1227 Gene3D - 553 689 IPR023299 GO:0000166
Arst3g05028 1227 CDD P-type_ATPase_APLT_Dnf-like 62 1016 - -
Arst3g05028 1227 FunFam Phospholipid-transporting ATPase IC 422 434 - -
Arst3g05028 1227 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Arst3g05028 1227 PRINTS P-type cation-transporting ATPase superfamily signature 856 875 - -
Arst3g05028 1227 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Arst3g05028 1227 MobiDBLite consensus disorder prediction 10 36 - -
Arst3g05028 1227 SFLD p-type atpase 407 907 IPR044492 -
Arst3g05028 1227 SFLD p-type atpase 407 907 IPR044492 -
Arst3g05028 1227 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 432 695 IPR023299 GO:0000166
Arst3g05028 1227 SFLD C1.7: P-type atpase like 407 907 - -
Arst3g05028 1227 SFLD C1.7: P-type atpase like 407 907 - -
Arst3g05028 1227 Coils Coil 771 791 - -
Arst3g05028 1227 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 32 1146 - -
Arst3g05028 1227 NCBIfam HAD-IC family P-type ATPase 829 935 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst3g05028 1227 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 32 1146 - -
Arst3g05028 1227 SUPERFAMILY Calcium ATPase, transmembrane domain M 59 1133 IPR023298 -
Arst3g05028 1227 FunFam Phospholipid-transporting ATPase 533 688 - -
Arst3g05028 1227 SUPERFAMILY HAD-like 413 898 IPR036412 -
Arst3g05028 1227 Pfam Cation transport ATPase (P-type) 521 616 - -
Arst3g05028 1227 SUPERFAMILY Calcium ATPase, transduction domain A 142 286 IPR008250 -
Arst3g05028 1227 MobiDBLite consensus disorder prediction 1 36 - -
Arst3g05028 1227 Gene3D - 123 289 - -
Arst3g05028 1227 Pfam E1-E2 ATPase 142 377 - -
Arst3g05028 1227 FunFam Phospholipid-transporting ATPase 121 290 - -
Arst3g05028 1227 Gene3D - 690 896 IPR023214 -
Arst3g05028 1227 Pfam Phospholipid-translocating ATPase N-terminal 47 111 IPR032631 -
Arst3g05028 1227 NCBIfam phospholipid-translocating P-type ATPase 60 1141 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Arst3g05028 1227 NCBIfam phospholipid-translocating P-type ATPase 60 1141 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Arst3g05028 1227 Pfam Phospholipid-translocating P-type ATPase C-terminal 884 1133 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05028 Arst-Chr3 125762805 125785119 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05028 15 1223 Primary Pumps ATPases AT1G59820 77.209 0.0 2000
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05028 K14802 - gmx:100815547 2148.63