Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05008 ATGGATTGTGACGGCGTCGTTTCAGGGGTGAGAATGGGAGAGGCTTCCGAAGAGGTTCACGTGTTGGCCGTTGATGACAGCCTCGTCGATCGCAAGGTCATTGAGCGCTTGCTCAAAATCCTAGCTTGTAAAGTGACTGCTGTGGATAGTGGACTGAGAGCACTGGAGTATCTTGGACTTGATCAACACAAAATTCCCTCTCAATCTAACGGTTTTGTTGAGGGTTTGAAGGTGGATCTAATTATCACGGACTACTGCATGCCCGGGATGACCGGTTACGACCTCCTCAAGAAAATCAAGGAATCTTCCACGTTCAGAGAAATTCCAGTTGTGATTATGTCCTCTGAAAATATCTTGCCGCGCATAGACAGGTGTTTGGAGGAAGGTGCAGAGGATTTCATAGTAAAGCCGGTGAAGTTATCTGACGTGAAGCGTTTGAAGGATTACGGCGTTGGTGGTAGGATCAACAAGAGGAAGCTACCAGATACTACTGAACCTGATCTCTCTTCATCACCACCGTCGGATTCCTCATCGCTACTTTCATCATCACCCTCTATTTCTCCATCTCCACCGTCCATCATTGATTCCCCAATCAGACGGCTCAAAATGACCACCGCCACCCATGATTGA 630 0.4778 MDCDGVVSGVRMGEASEEVHVLAVDDSLVDRKVIERLLKILACKVTAVDSGLRALEYLGLDQHKIPSQSNGFVEGLKVDLIITDYCMPGMTGYDLLKKIKESSTFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKDYGVGGRINKRKLPDTTEPDLSSSPPSDSSSLLSSSPSISPSPPSIIDSPIRRLKMTTATHD 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05008 209 SUPERFAMILY CheY-like 19 146 IPR011006 -
Arst3g05008 209 CDD REC_typeA_ARR 21 146 - -
Arst3g05008 209 MobiDBLite consensus disorder prediction 165 189 - -
Arst3g05008 209 Gene3D - 19 173 - -
Arst3g05008 209 ProSiteProfiles Response regulatory domain profile. 20 151 IPR001789 GO:0000160
Arst3g05008 209 SMART REC_2 19 147 IPR001789 GO:0000160
Arst3g05008 209 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 152 IPR045279 GO:0009736
Arst3g05008 209 MobiDBLite consensus disorder prediction 154 209 - -
Arst3g05008 209 Pfam Response regulator receiver domain 21 143 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05008 Arst-Chr3 125621272 125622615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05008 9 199 Response Regulator Gene Family AT1G59940 57.944 4.58e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst3g05008 Response_reg 1.5e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05008 K14492 - gmx:100527828 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05008 3 125621272 125622615 Arst3g05008 3 125621272 125622615 ECH