Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05002 ATGGAAAAGAATAATGTCTATGATGCGTCAACATGGGATGATGGTGTTGAAGATAATAATGGGCATTCATCAAAACACAAGAGGCTCAAGTTATTTGGGTTTGAACTAATAAACCCAAAGGATCATTCAGAAGTAGTAATGGAAGATGAAAGTGTGAATTCTTCAAATTCAGCTTCATTATTATTAGAGGGAGATCGTGATGAGAAAAATAATAATAATAAAAAATTAGAGTGTCAATATTGTTACAAGGAATTCGCAAATTCACAAGCACTAGGAGGACACCAAAATGCACACAAAAAAGAGAGAATGAAGAAGAAGAAGTTGCAGCTTCAAAAAACAAACGCTACCACAATCAACCACTACCTTCTAAAGCAAGCAAGCTCCAATATCAATAATATTATTGATAATTGGTTATATAATCCTTCTTCCTTTGTTAGTAATAATTCTGAATCTCAGATTAGCTTTAATAATAATGATCAAGATGATGATGATGGTCTTATTAATGTTTCAAAGTGGCATGTTCCTAATTCTCATGATCAACAAGAAAATTATTGTATGTTCAATTTCTCCCATGCTAGTTCGAATCATCATCAGGGACATGTCAAAGGTTTGGATCTTCAGCTAGGCCTCAGCTTGGAGTCAAATACAAGAACTTTTTTATGGAGAACATAG 672 0.3333 MEKNNVYDASTWDDGVEDNNGHSSKHKRLKLFGFELINPKDHSEVVMEDESVNSSNSASLLLEGDRDEKNNNNKKLECQYCYKEFANSQALGGHQNAHKKERMKKKKLQLQKTNATTINHYLLKQASSNINNIIDNWLYNPSSFVSNNSESQISFNNNDQDDDDGLINVSKWHVPNSHDQQENYCMFNFSHASSNHHQGHVKGLDLQLGLSLESNTRTFLWRT 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05002 223 ProSitePatterns Zinc finger C2H2 type domain signature. 78 98 IPR013087 -
Arst3g05002 223 Gene3D Classic Zinc Finger 51 132 - -
Arst3g05002 223 SUPERFAMILY beta-beta-alpha zinc fingers 72 103 IPR036236 -
Arst3g05002 223 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 103 IPR013087 -
Arst3g05002 223 PANTHER ZINC FINGER PROTEIN 5 20 213 IPR044299 GO:0010090
Arst3g05002 223 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05002 Arst-Chr3 125585425 125586234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05002 28 152 C2H2 Transcription Factor Family AT1G68360 36.170 2.99e-18 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05002 - - ahf:112791844 426.787