Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04988 ATGCCTCTTTGCCACCATGACCTCCTCTGCTGCGAGGACTCCTCCGGAATCCTCTCCACACAACACTCGCCGGAATCACCTTCATCATCATCGTCTTCTTCGTCTTCTTCATTGTCGTCGTCGTGGACGGAGGAATCCATCGCGTGTTTCATGGAGCACGAACGCAACTTCGTCCCCGGATTGGAGTACCTCTCCAGGTTTCAGTCTCGCTCCCTCGACGCCAACGCAAGAGAACAATCCGTTGCATGGATCCTCAAGGTTCACTCGTACTATGGCTTTCAGCCTCTGACGGCATACCTCTCCGTTAATTACTTGGATCGGTTTTTGGACTCTCGCCAGCTGCCGCAAACAAGTGGGTGGACTCTTCAGCTTCTAGCAGTTGCTTGTTTGTCTTTAGCGGCAAAGATGGAGGAACCTCTTGTTCCCTCTCTCTTGGACCTTCAGGTGGAAGGAGCCAAATACGTATTTGAGCCGGGAACCATACGTAGGATGGAGCTACTTGTTCTTAGTGTGTTGGATTGGAGGCTTAGATCAGTTACCCCACTTAGCTTCCTTGATTTCTTTGCGTGCAAAATTGATTCAGCTGGAAATTTTACTCCCTTCCTCATTTCTCGAGCTACGGAAATCATCTTATCTAATATCCAAGAGGCTAGCTTTCTTGCTTACAGGCCATCATGTATTGCTGCCGCAGCAATACTCTGTGCAGCTAATGAAATTCCTAATTGGTCTCTTGTTAAGCCTGAGAATGCTGAATCATGGTGCCAGGGACTAAGAAAAGAAAAAATTATAGGGTGCTACCAGTTGATGCAAGAACTTATTGTGATTCACAGTAATCGGAGAAATCCACCTAAGTATTTGCCACAGATGCGAGTAACAACTAGGACCCGAATGAGGTCGAGTACTATCACTGTTGCATCATCATTCCCCTCGCCCTCTTCTTCATTATCCTTGTCTTACAATAAAAGGAGAAAATTAAATGACAGTTTGCGGGTGAATGAAGATGAAAAGGGAAACTCCGTGTGA 1023 0.4673 MPLCHHDLLCCEDSSGILSTQHSPESPSSSSSSSSSSLSSSWTEESIACFMEHERNFVPGLEYLSRFQSRSLDANAREQSVAWILKVHSYYGFQPLTAYLSVNYLDRFLDSRQLPQTSGWTLQLLAVACLSLAAKMEEPLVPSLLDLQVEGAKYVFEPGTIRRMELLVLSVLDWRLRSVTPLSFLDFFACKIDSAGNFTPFLISRATEIILSNIQEASFLAYRPSCIAAAAILCAANEIPNWSLVKPENAESWCQGLRKEKIIGCYQLMQELIVIHSNRRNPPKYLPQMRVTTRTRMRSSTITVASSFPSPSSSLSLSYNKRRKLNDSLRVNEDEKGNSV 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04988 340 CDD CYCLIN_AtCycD-like_rpt2 179 269 - -
Arst3g04988 340 SUPERFAMILY Cyclin-like 161 280 IPR036915 -
Arst3g04988 340 Pfam Cyclin, N-terminal domain 47 176 IPR006671 -
Arst3g04988 340 FunFam D2/4-type cyclin 60 177 - -
Arst3g04988 340 Pfam Cyclin, C-terminal domain 179 280 IPR004367 -
Arst3g04988 340 SMART cyclin_7 82 170 IPR013763 -
Arst3g04988 340 SUPERFAMILY Cyclin-like 39 176 IPR036915 -
Arst3g04988 340 ProSitePatterns Cyclins signature. 77 108 IPR006671 -
Arst3g04988 340 Gene3D - 50 240 - -
Arst3g04988 340 SMART Cyclin_C_2 179 305 IPR004367 -
Arst3g04988 340 PANTHER CYCLINS 41 273 IPR039361 -
Arst3g04988 340 Gene3D - 60 177 - -
Arst3g04988 340 MobiDBLite consensus disorder prediction 20 39 - -
Arst3g04988 340 CDD CYCLIN_AtCycD-like_rpt1 76 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04988 Arst-Chr3 125518165 125522341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04988 7 303 Core Cell Cycle Gene Families AT1G70210 64.548 9.01e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04988 K18810 - gmx:100778578 466.463