Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst3g04985 | ATGGCGACGGCACAGGAGGAAGTAGCAGCATCACAAGCGGAGAAGGGGAAGATGAGGTGGTGGGAGCTGGAGGAGGATGACGGCGAGGACCTTGACTTCCTCCTGCCGCCGAAGCAGGTGATAGGTCCTGACGAGAACGGAATCAAGAAGGTCATAGAGTACAAGTTCGACGACGAAGGCAACAAACTCAAGATCACTACCACTACTCGCGTTCGCAAGCTCGCCAACGCCCGCCTCAGTAAGCAGGCCGTCCTCCGCCGACAATGGCAAAAGTTCGGAGACGCCGTTCACGAGGATGTCGGCAGCCGCCTTACCATGGTCTCCACTGAAGAGATCGTCCTTGAGCGCCCCAAGCCCCTAGGTGCGAAATCAGAGGAGCCAAAGGCTACTGGAGACTCGCTATCTCAAATCAACAAGGGTGCTGTTCTTATGGTGTGTAGGACTTGTGGGAAGAAGGGTGACCATTGGACCTCGCGGTGTCCTTACAAGGACCTTGTGCAGCCAACAGAGGGATTTGTCGATAGGCCTCCAACTTCAGATGGCCCGACTCCTGCATCTGGTTCGACCAAGGGAGCATATGTGCCTCCTGGTATGAGGGCGGGTGCCGAGAGGAGCGGATCGGATATGAGGCAGCGTAGGAATGATGAGAATTCTGTGAGGGTCACCAATCTCTCGGAGGACACCAGAGAGCCCGATTTGCTGGAGCTGTTCCGCCCTTTTGGTGCTGTGAGCAGAGTATATGTGGCTATTGATCAAAAGACAGGCATGAGCAGGGGGTTTGGCTTTGTTAACTTTGTGAACAGGGAAGATGCACAAAGAGCTATCAACAAACTCAATGGTTATGGGTACGACAATCTCATCCTAAGAGTTGAATGGGCAACCCCAAGGGCAAATTAG | 897 | 0.5396 | MATAQEEVAASQAEKGKMRWWELEEDDGEDLDFLLPPKQVIGPDENGIKKVIEYKFDDEGNKLKITTTTRVRKLANARLSKQAVLRRQWQKFGDAVHEDVGSRLTMVSTEEIVLERPKPLGAKSEEPKATGDSLSQINKGAVLMVCRTCGKKGDHWTSRCPYKDLVQPTEGFVDRPPTSDGPTPASGSTKGAYVPPGMRAGAERSGSDMRQRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAIDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAN | 298 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst3g04985 | 298 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 217 | 295 | IPR000504 | GO:0003723 | |
Arst3g04985 | 298 | FunFam | Eukaryotic translation initiation factor 3 subunit G | 181 | 298 | - | - | |
Arst3g04985 | 298 | Pfam | Eukaryotic translation initiation factor 3 subunit G | 39 | 165 | IPR024675 | - | |
Arst3g04985 | 298 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G | 24 | 294 | - | - | |
Arst3g04985 | 298 | CDD | RRM_eIF3G_like | 218 | 293 | IPR034240 | - | |
Arst3g04985 | 298 | Hamap | Eukaryotic translation initiation factor 3 subunit G [EIF3G]. | 17 | 297 | IPR017334 | GO:0003743|GO:0005737|GO:0005852 | |
Arst3g04985 | 298 | PIRSF | Transl_init_eIF-3_RNA-bind | 9 | 298 | IPR017334 | GO:0003743|GO:0005737|GO:0005852 | |
Arst3g04985 | 298 | SMART | rrm1_1 | 218 | 291 | IPR000504 | GO:0003723 | |
Arst3g04985 | 298 | MobiDBLite | consensus disorder prediction | 168 | 218 | - | - | |
Arst3g04985 | 298 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 219 | 285 | IPR000504 | GO:0003723 | |
Arst3g04985 | 298 | SUPERFAMILY | RNA-binding domain, RBD | 208 | 297 | IPR035979 | GO:0003676 | |
Arst3g04985 | 298 | CDD | eIF3G | 46 | 164 | IPR024675 | - | |
Arst3g04985 | 298 | Gene3D | - | 181 | 298 | IPR012677 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst3g04985 | Arst-Chr3 | 125499631 | 125501448 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst3g04985 | 11 | 296 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 69.182 | 2.06e-152 | 427 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst3g04985 | K03248 | - | gmx:100818725 | 491.5 |