Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04955 ATGGCATCAAGATCATATGCTAATCTCTTTGACTTAGTTTCTGGAGGAGATTTGCTGGATATTCCTGGCACCCCAAGAGCTCTTCCAAGGATTATGACTGTTCCTGGAATTATCTCTGACCTTGATAGTTGTGGTGCTAATGACGGGGATTCAGATGTAAGCTCCTCTGGTTGCCGGGAGCGGAAGATCATTGTCGCAAACATGCTGCCATTGCATGCTAAAAGAGATGCAGAAAATTCTAAGTGGTGCTTCAGTTGGGATGAGGATTCAATTTTACTACAATTGAAAGATGGTTTTTCTTCTGATACGGAGGTAATTTATGTGGGTTCACTTAAGGTTGATATAGATGCCAGTGAGCAGGAAGAAGTTGCCCAGAGATTACTGGATGACTTCAATTGTGTACCTACCTTTCTATCCCATGATCTCCAGAAAAAGTTCTATCTTGGGTTTTGCAAGCAGCAGCTTTGGCCTCTCTTTCATTATATGCTACCAGTGTGCCCCGATCATGGTGATCGCTTTGACCGCATACTATGGCAGGCTTATGTTTGTGCAAACAAAATATTTGCCGACAAGGTTATGGAAATAATCAATCCTGATGATGATTTTGTCTGGGTTCATGATTATCACCTGATGGTTTTGCCTACTTTCTTGAGGAAGAGATATAATCGAGTTAAACTTGGATTCTTCTTGCACAGTCCTTTTCCTTCATCTGAAATTTATCGAACTTTACCTGTAAGGGATGAAATTTTGAGGGGACTTCTGAATGCTGATTTAATTGGTTTTCATACATTTGATTATGCACGCCACTTCCTTTCTTGCTGCAGCAGAATGCTAGGTCTGGACTATGAATCTAAGCGAGGACATATAGGACTTGATTACTTTGGCCGTACTATATTTATCAAAATTTTGCCGGTTGGCATTCACATGGGTAGGCTTGAATCTGTATTAAATCTTCCTTCTACATCTGCTAAACTAAAAGAGATTCAGGAAGAGTTTGAGGGTAAGAAGGTGATTGTTGGTGTTGATGATATGGATATTTTTAAAGGCATCAGTTTGAAACTTCTAGCTGTGGAGCATCTGCTGCAGGAGAATCCTGATATGCAGGGCAAAGTTGTCCTTGTTCAAATTGTAAATCCTGCAAGGGGTTTAGGGAAGGATGTTCAGGAAGCAAAGAAGGAAACATATTTAATTGCCCAGAGGATTAATGATACCTATGGTTCAGAGGAATATCAGCCTGTCAAACTCATTGACCGCCATGTTCCTCGATTTGAGAAGAGTGCTTATTATGCTGTAGCTGAATGTTGCATTGTAAATGCAGTAAGGGATGGCATGAACCTAGTCCCATACAAATATCTTGTCTGCAGGCAACAAACTGCTAAACTAGATGAAGCATTGGGTAGGAAAGTTGATTCTCCCCGAACAAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCACCTTCTCTTAGTGGGGCTATCAGGGTCAATCCCTGGGACATTGATGCTGTTGCTGATGCTCTGAGCTTGGCCCTTACAATGAACGATTCTGAGAAGCAATTGCGCCATGAGAAACACTATCGGTATGTCAGTTCTCATGATGTAGCATATTGGGCACGCAGCTTTATGCAGGATTTGGAGAGAGCCTGCAAAGATCATTACACCAAAAGGTGCTGGGGAATTGGCTTGGGTCTAGGGTTTAGAGTTGTTTCTCTTTCTCCTGGATTTAGGAAGTTGTCTATTGATCATGTTGTTTCAGCTTACAAGCGAACCAATAGAAGGGCCATCTTTCTTGATTATGATGGTACTGTTGTACCGCACTCTTCTATAAATAAAGTCCCCAGCCCGGAAGTCATATCTGTGCTAAACGCTCTGTCTAGTGATCCCAAGAACATTGTTTTCATTGTTAGTGGGAGGGGAAGAGATTCTCTGAGTGATTGGTTCAGTTCATGCCAATTGCTGGGACTTGCTGCTGAGCATGGTTACTTTTTAAGGTGGAATAGAGATTCTGAATGGGAATGCAGTCACTTGTCTGCAGACCTTGACTGGAAAAACATAGCAGAACCTGTCATGCAGTTGTATACAGAGGCAACTGATGGTTCCAGCATTGAAATTAAGGAAAGCGCTTTGGTGTGGCATCATCAAGATGCAGACCCGGATTTTGGTTCCTGCCAAGCCAAGGAATTGTTGGATCACTTGGAAAGTGTACTTGCAAATGAACCAGCAGTTGTTACGAGAGGCCAGCATATTGTTGAAGTTAAGCCACAGGGAATAAGCAAAGGTTTGGTAGCCGAAAAGGTTATATCAACCATGTTTAATGGTGGTAATCCACCGGATTTTGTTATGTGCATTGGCGATGATAGGTCTGATGAAGACATGTTTGAGAGCATTTTAAGGTCAGTATCCTGCCCGTCATTACCGGCGGCTCCAGAGATTTTTGCCTGCACTGTAGGTAGGAAGCCGAGCAAGGCGAAGTATTTTCTTGACGACACTTTGGATGTAGTGAAGTTACTTCAGGGTCTTGCTTCTTCATCCAATCCAAAACCCAGGCATCTTGCGCAATTCCAAGTATCTTTCGAGAGCACAATTTGA 2589 0.4245 MASRSYANLFDLVSGGDLLDIPGTPRALPRIMTVPGIISDLDSCGANDGDSDVSSSGCRERKIIVANMLPLHAKRDAENSKWCFSWDEDSILLQLKDGFSSDTEVIYVGSLKVDIDASEQEEVAQRLLDDFNCVPTFLSHDLQKKFYLGFCKQQLWPLFHYMLPVCPDHGDRFDRILWQAYVCANKIFADKVMEIINPDDDFVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLESVLNLPSTSAKLKEIQEEFEGKKVIVGVDDMDIFKGISLKLLAVEHLLQENPDMQGKVVLVQIVNPARGLGKDVQEAKKETYLIAQRINDTYGSEEYQPVKLIDRHVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYLVCRQQTAKLDEALGRKVDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALSLALTMNDSEKQLRHEKHYRYVSSHDVAYWARSFMQDLERACKDHYTKRCWGIGLGLGFRVVSLSPGFRKLSIDHVVSAYKRTNRRAIFLDYDGTVVPHSSINKVPSPEVISVLNALSSDPKNIVFIVSGRGRDSLSDWFSSCQLLGLAAEHGYFLRWNRDSEWECSHLSADLDWKNIAEPVMQLYTEATDGSSIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVTRGQHIVEVKPQGISKGLVAEKVISTMFNGGNPPDFVMCIGDDRSDEDMFESILRSVSCPSLPAAPEIFACTVGRKPSKAKYFLDDTLDVVKLLQGLASSSNPKPRHLAQFQVSFESTI 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04955 862 Gene3D - 592 707 IPR023214 -
Arst3g04955 862 Gene3D - 722 853 IPR023214 -
Arst3g04955 862 NCBIfam HAD-IIB family hydrolase 594 795 IPR006379 -
Arst3g04955 862 SUPERFAMILY HAD-like 593 840 IPR036412 -
Arst3g04955 862 FunFam Alpha,alpha-trehalose-phosphate synthase 315 530 - -
Arst3g04955 862 Pfam Trehalose-phosphatase 596 829 IPR003337 GO:0003824|GO:0005992
Arst3g04955 862 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 722 853 - -
Arst3g04955 862 CDD GT20_TPS 61 546 IPR001830 GO:0003824|GO:0005992
Arst3g04955 862 Gene3D Glycogen Phosphorylase B; 55 313 - -
Arst3g04955 862 NCBIfam trehalose-phosphatase 591 840 IPR003337 GO:0003824|GO:0005992
Arst3g04955 862 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 30 842 IPR001830 GO:0003824|GO:0005992
Arst3g04955 862 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 30 842 IPR001830 GO:0003824|GO:0005992
Arst3g04955 862 Pfam Glycosyltransferase family 20 61 546 IPR001830 GO:0003824|GO:0005992
Arst3g04955 862 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 550 - -
Arst3g04955 862 CDD HAD_TPP 594 835 - -
Arst3g04955 862 Gene3D Glycogen Phosphorylase B; 314 530 - -
Arst3g04955 862 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 592 709 - -
Arst3g04955 862 FunFam Trehalose-6-phosphate synthase 2 676 755 - -
Arst3g04955 862 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04955 Arst-Chr3 125258065 125262759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04955 1 862 Trehalose Biosynthesis Gene Families AT1G23870 74.654 0.0 1363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04955 K16055 - gmx:100775779 1587.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04955 3 125258065 125262759 Arst3g04955 3 125258065 125262759 ECH