Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04948 ATGGCTTCTTCTTCAACCAGGATCTCCAGGCTTCTCTCTCGCTCCTCCGCCTCTCTCTTTTCGCGAGGTGGGAAGGGTTACCTTGGTGCAGGATTCAGCAGATATAGCACTGCCACTGCCCTTGAAGAAGAACCAATTAAACCAGCAGTGCAAGTAGAACACACCCAACTCCTGATTGGTGGGAAATTCGTTGATGCTCTTTCTGGTAAAACTTTTCCAACCTTGGATCCAAGAACAGGGGAAGTGATTGCTCATGTTGCTGAGGGTCACTCTGAAGATGTTGATAGAGCAGTTGCAGCCGCAAGAAAGGCATTTGATCAAGGGCCATGGCCTAAGATGACAGCCTATGAAAGGCAAAGGATATTGTTGCGAGCTGCCGATCTGCTTGAGAAGCACAATGATGAGCTTGCAGCACTTGAGACCTGGGATAATGGGAAGCCATATGAACAATCTGCTCAGATTGAAATCCCAATGCTTGTTCGCCTTTTCCGGTACTATGCTGGTTGGGCAGATAAGATCCATGGTATGACCGTTCCGGCTGATGGGCAATATCATGTGCAAACATTGCACGAACCGATCGGTGTTGCTGGTCAGATCATTCCCTGGAATTTCCCTCTCCTCATGTTTGCTTGGAAGGTTGGACCGGCATTGGCCTGTGGCAATACAATTGTTCTCAAAACCGCTGAGCAGACACCATTGTCTGCTTTGTACGCAGCAAAACTATTTCATGAGGCTGGACTTCCTGAAGGTGTTTTGAATATGGTATCAGGCTTTGGTCCCACTGCTGGCGCTGCTCTTGCAAGTCACATGGATGTGGATAAGCTTGCCTTTACTGGTTCTACTGATACCGGGAAAGTTGTCCTTGAGCTAGCGGCTAGAAGCAATCTTAAGCCAGTAACTTTGGAGCTTGGTGGAAAATCTCCTTTTATTGTATGTGAGGATGCCGATGTAGATCAGGCGGTTGAGCTAGCACACTTTGCCTTATTCTTTAATCAGGGACAATGTTGCTGTGCTGGGTCTAGGACATATGTACATGAACGTGTATATGACGAGTTTGTAGAGAAAGCAAAGGCTCGTGCTTTGAAACGTATTGTTGGTGATCCATTCAAGAGTGGAATAGAGCAAGGTCCTCAGATTGATTCTGAACAATTTGAGAAGATACTGAAGTATATCAGATCCGGCGTTCAAAGTGGAGCTACACTAGAAACCGGAGGAGATAGACTTGGCAGCAAGGGCTTCTATGTTCAGCCTACCGTCTTCTCAAATGTTGAGGATGGCATGCTGATTGCAAAGGAAGAAATATTTGGCCCGGTGCAATCCATACTAAAATTCAAGGACCTCGATGAGGTTATTGAAAGAGCGAACAACACGCGGTATGGACTGGCGGCAGGGGTGTTCACGAAGAACATAGACACGGCGAACACGCTGACGAGAGCGTTGAGAGTTGGAACAGTTTGGGTGAACTGCTTTGACACATTTGATGCAGCAATTCCATTTGGTGGTTACAAGATGAGTGGGCAGGGAAGGGAAAAGGGAGAGTACAGCCTCAAGAATTACTTGCAAGTCAAGGCAGTTGTTACCCCTTTGAAGAACCCTGCATGGCTTTAG 1608 0.4708 MASSSTRISRLLSRSSASLFSRGGKGYLGAGFSRYSTATALEEEPIKPAVQVEHTQLLIGGKFVDALSGKTFPTLDPRTGEVIAHVAEGHSEDVDRAVAAARKAFDQGPWPKMTAYERQRILLRAADLLEKHNDELAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADKIHGMTVPADGQYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPEGVLNMVSGFGPTAGAALASHMDVDKLAFTGSTDTGKVVLELAARSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTYVHERVYDEFVEKAKARALKRIVGDPFKSGIEQGPQIDSEQFEKILKYIRSGVQSGATLETGGDRLGSKGFYVQPTVFSNVEDGMLIAKEEIFGPVQSILKFKDLDEVIERANNTRYGLAAGVFTKNIDTANTLTRALRVGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPAWL 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04948 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 307 496 IPR016163 GO:0016620
Arst3g04948 535 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 59 320 - -
Arst3g04948 535 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 39 525 - -
Arst3g04948 535 SUPERFAMILY ALDH-like 50 529 IPR016161 GO:0016491
Arst3g04948 535 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 301 308 IPR029510 GO:0016491
Arst3g04948 535 FunFam Aldehyde dehydrogenase, putative 497 523 - -
Arst3g04948 535 CDD ALDH_F2BC 52 527 - -
Arst3g04948 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 69 525 IPR016162 GO:0016491
Arst3g04948 535 FunFam Mitochondrial aldehyde dehydrogenase 2 307 496 - -
Arst3g04948 535 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491
Arst3g04948 535 Pfam Aldehyde dehydrogenase family 65 525 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04948 Arst-Chr3 125165074 125168936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04948 4 535 Aldehyde Dehydrogenase Gene Family AT3G48000 78.212 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04948 K00128 - gmx:100777399 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04948 3 125165074 125168936 Arst3g04948 3 125165074 125168936 ECH