Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04946 ATGATGTTTCAATGGAAAGAATTCATGCTTTTATTCATTACCTTTATTCTTTTGTGTTCCCAAACTTATTCTGCCAGCAGCAATTGTGTCCTTAACATTCAATACTCTTCAACCTTGAGTAACTCAAACTGTGAACATCATAGTTGGGGAGGATTCATCAATACTTGTTGTCAACCACTTTTTGATGATTATCTATATGCCTTGGGGCTTCATGCCAACAAAACTGGAAAGATATTTTTGAACCCCTCAGAGCAAGAAAACTGCTTCGTGCCGGCGAAGAATTTTAAGCTCTGCGGCGGGGTCAAGAAGTTGACAAGGGGAGCCGGTGGTTGCTCTGATTACACTGTTATGGATGTCACCAAGAAGCTTGGTGAAAATTTAAGGAGATTAGATGAAGATTGTATGAATGACAAGCCAAATGGAAACTGCAGTTCATGCTTGAAATCATGGGAGGATATAGTTGTAAGATCAGAGGATACAAAGGAATCAGAATCAGAGAGTTTCAGTGATGATGTTTGTAGGTTTGCTGTTCTTATCACAATGACAAGCATCAAAGTTTATGATAGAGAATCAATTCAGAAAGTTTATAAATGTATAGGGGGAAACACCATTTCTGAAGATAAGCAAGAAATTCAAGCAAAGGGGCGCAATGATAAGCCAGGTCTCAGGATTCTAGCCTTTGCTTTAACTGGAGTCACAGTAGTAGTACTTCTTGCAGCACTTGCATTTTTTGTCAGAAGAAAAAGAGGTGCTACAACTCCCACATTACTAGAAGTTTATGAGGATTCAGCATCAGTTAAAATAACTTTGAAGGATGTTTATGTAGCAACTAACAATCTCAGCGCCGCGAATTTCATTGGCCAAGGCTCGGCAGGGAAAGTGTACAAAGGTATACTCTCCAATGGTCTACATGTTGCAGTGAAGCATATTACCAATGGAAGTTACATGGAAACATTTGTTAGAGAAGTGAAAAGCCTTTCCCATGTTAAACATCCGAACCTTGTTACGCTGCTCGGATACTGCGAAAACAATGAATCTGAATGCTTCCTAGTCTATGAACTGTGCTGCAATGGAAGCCTGTCACATTGGCTATTTGACTATGATAAAGTTCTTTCATGGATTCAAAGACTAGAGATTGCTGTTGATAGTGCAAGAGGCCTCAAGTTTCTACAAACCTACCCAGGTGGCTGCATTGTTCACCGTGATATAAAGCCAGCAAACATTCTTCTTGATGCCAATTTTCAAGCAAAACTTTCAGACTTCGGGTTGTCCAAGGTTATGGATGTGGATCAATCCTATGTGAGCTCCGAAGTGAGAGGAACATTTGGCTATATAGATCCTGAGTATCGGACAAATCACCATGTGAATGCCTCTGGAGATGTTTACAGCTTTGGCATAGTGTTGTTGCAACTTCTATCAGGACAAAGGCTCCTTCACAGCAATTTTCACAGACCAATGTCACTAAGTAAAATGGCCAAAGATTCTGCTAGAGGTGGCGATATTTCAGAATTTGCAGACCCTAAACTCAATGGAGAGTATTCTGTAGAAGCATTTGGCATCATACTGAAGCTAGCTTTGTCTTGCATAGGGCTCAAGGAACAAAGGCCCTCTATAACAAAAGTGTTACATAGTCTAGAAAAGGCACTAGATATCTCATCATCATAA 1665 0.4006 MMFQWKEFMLLFITFILLCSQTYSASSNCVLNIQYSSTLSNSNCEHHSWGGFINTCCQPLFDDYLYALGLHANKTGKIFLNPSEQENCFVPAKNFKLCGGVKKLTRGAGGCSDYTVMDVTKKLGENLRRLDEDCMNDKPNGNCSSCLKSWEDIVVRSEDTKESESESFSDDVCRFAVLITMTSIKVYDRESIQKVYKCIGGNTISEDKQEIQAKGRNDKPGLRILAFALTGVTVVVLLAALAFFVRRKRGATTPTLLEVYEDSASVKITLKDVYVATNNLSAANFIGQGSAGKVYKGILSNGLHVAVKHITNGSYMETFVREVKSLSHVKHPNLVTLLGYCENNESECFLVYELCCNGSLSHWLFDYDKVLSWIQRLEIAVDSARGLKFLQTYPGGCIVHRDIKPANILLDANFQAKLSDFGLSKVMDVDQSYVSSEVRGTFGYIDPEYRTNHHVNASGDVYSFGIVLLQLLSGQRLLHSNFHRPMSLSKMAKDSARGGDISEFADPKLNGEYSVEAFGIILKLALSCIGLKEQRPSITKVLHSLEKALDISSS 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04946 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 398 410 IPR008271 GO:0004672|GO:0006468
Arst3g04946 554 Pfam Protein kinase domain 284 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04946 554 SUPERFAMILY Protein kinase-like (PK-like) 263 545 IPR011009 -
Arst3g04946 554 ProSiteProfiles Protein kinase domain profile. 280 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04946 554 Pfam SPARK 25 166 IPR043891 -
Arst3g04946 554 Gene3D Phosphorylase Kinase; domain 1 243 354 - -
Arst3g04946 554 FunFam probable receptor-like protein kinase At5g59700 355 554 - -
Arst3g04946 554 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 159 546 - -
Arst3g04946 554 Gene3D Transferase(Phosphotransferase) domain 1 356 553 - -
Arst3g04946 554 SMART serkin_6 280 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04946 Arst-Chr3 125152627 125155469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04946 223 546 Receptor kinase-like Gene Family AT1G70130 38.576 4.85e-59 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Arst3g04946 Pkinase 5.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04946 - - gmx:100790181 702.975