Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04920 ATGAGTGATTCTACGGTTTTAGAGTGGCTTAGGCCCTTTGTTGAGGCCAAAGCTTGGGACTTTGTGGTTGTTTGGAAATATGGGGATGACCCTACTAGCTTCATTGAGTGGTTGGGTTGTTGCTGTAGTGGGAGCTGTGGTGAAAGCATTGAGGATGCAAAGAAGCTCAAAGATGAAGAAATGGATGAAAAACAGAACGACATAGATTCTTCTTCCATTTGCAAGGATGCACATTTTCAGCATCCAATTAGAACCAAGGCTTGTAAGGCTCTTTATCAGCTTCCTTTTGCAATGTCTCTCTATTCTGGTGTCCATGGAGAGGTTGCAATATCGCAGCAACCAAAATGGCTTACTCATGGAGAGGAAATTGGAACACAAGTTTTGATCCCTGTTGTTGGTGGTCTTGTTGAGCTCTTCACGACAAAGCTTGTTCCAAAAGACAATAACATCTTAGAGTTCATAAGAGCACATTGCTATGTTTCATTGAAGCAAGAAGCTATATGTGCACAGCACCACACCGATGTGAACTTCAGTGAAAATCTGTCATCAGAAGAACAATACACACAGAGCTCGCCACAACTTGCGTCAACTTTAACTGACGGTGTCCATCTTCTTGCAGCAAACTGGTGCAAATCGGATCCTTACATTGAAGAACCTTCCAGTGGATCTAATCCTTCAAGCGAATACACATCATTTGATTCGAAATTTGTCTGCTTGACTCACCATGAATATCTGGGTGAGTCGGTTAAATTATCACCTACCTGCAAAACCGAAAGGCCTAAGTACAATGAAACTTCAGGGAAGCAGCAAGGAACTTTGAGTTCCTATTGTGGCAATGGCAAAAGAAATAAAACAAAATCAGTCAGGGTGCCTCCGAAGGAAGGTTACCATGCTAAAAATCTTGCCACAGAGAGGAGAAGAAGAAACAAGATTAAAAATGGCCTGTTCACTTTAAGGTCTCTAATGCAAACCGAAGTGAATCATATAAGCAGGACAGAGTTCTTGCTTAAGGTATGCTGGGAGCAGAAGCCAGGTGGGTTTTCAAGGTTGATGGAAGCTATAAATTCATTTGGATTTCAGGTGGAAACTGCCAATATGACCACAATTGACGGAAAGGCTCAGATCATTCTAACAGTTGAGGCAGCCAAGGAGGGAATTCACCCAACTAAGCTGAAGGATTTTTTGACAGAGCAAACAGGTTGA 1203 0.4231 MSDSTVLEWLRPFVEAKAWDFVVVWKYGDDPTSFIEWLGCCCSGSCGESIEDAKKLKDEEMDEKQNDIDSSSICKDAHFQHPIRTKACKALYQLPFAMSLYSGVHGEVAISQQPKWLTHGEEIGTQVLIPVVGGLVELFTTKLVPKDNNILEFIRAHCYVSLKQEAICAQHHTDVNFSENLSSEEQYTQSSPQLASTLTDGVHLLAANWCKSDPYIEEPSSGSNPSSEYTSFDSKFVCLTHHEYLGESVKLSPTCKTERPKYNETSGKQQGTLSSYCGNGKRNKTKSVRVPPKEGYHAKNLATERRRRNKIKNGLFTLRSLMQTEVNHISRTEFLLKVCWEQKPGGFSRLMEAINSFGFQVETANMTTIDGKAQIILTVEAAKEGIHPTKLKDFLTEQTG 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04920 400 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 323 396 - -
Arst3g04920 400 MobiDBLite consensus disorder prediction 257 289 - -
Arst3g04920 400 MobiDBLite consensus disorder prediction 258 282 - -
Arst3g04920 400 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 10 156 IPR025610 -
Arst3g04920 400 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 289 325 IPR036638 GO:0046983
Arst3g04920 400 ProSiteProfiles ACT domain profile. 335 400 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04920 Arst-Chr3 124941086 124943400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04920 323 367 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 51.111 1.13e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst3g04920 bHLH-MYC_N 2.4e-17 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04920 - - adu:107481133 811.986