Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04905 ATGTTGGGGCGCAAAAATGTCTTGGATGAGGCTCGATTTCAGTATCAAACCAATGAAGCAAATCAACTGCAGTTGTTTGGGAATATACAAGCTGGATGCAATATTGACCCTGTTAGTTACGTTGGAAATGAGTATCTCAGCTCCATGTTTCGATCTAATAAACGAAGCAGAGCAGCAGAAGATATATCAAAGCAGCAAAAGCTTCAGATTTCCTTAAATTACAATGTCTGTCAGGACAAAGCTGATCGATTGGCAAATAGTCCAAATCCAAATCAAGTGTCAACAGGATTGAGGCTTTCTTATGATGATGATGAGCGCAATTCTTCTGTTACTTCTGCTAGTGGTAGCATGACTGCCGCATCTTCAATCATATTATCCCTTGGTGACAATTTCAGAACCGAGCTTGATAGGCAGCAAGAAGAGCTGGACCAGTATATTCAGCTACAGAAGGACCAATTGTCAAAAGCAGTGAGAGATATGAAACAAAAACACATGACCAGTGTCTTTAATGCCATTGAGAAAGGTGTTAGCAAGAAGCTAAGGGAAAAAGATGCAGAGATAGAGAACATTAACCAGAAAAACAGGGAACTAGCAGAGAGAATAAAACAAGTATCCATCGAAGCACAGAGCTGGCACTACAAAGCAAAGTATAATGAACAAGTTGTCAATGTATTAAGGAACAATCTCCAGCAAGCAATTACACAAGGAGAGGAACAAGGAAAGGAAGGGTTCGGAGACAGTAGCGAAGTTGACGATGCCACCTCATATATCGATTTGAATAGCTTGATCAGCAATCCAGGTGCACGAATGAAATCTACTTTGAAGGAGCACCAAGGCATAGAGAATCTGATGTGCAGAGCATGCAGGGCGAAGGAGGTTTCCATGTTGTTGATGCCTTGCAGACACTTATGCTTGTGTGACAACTGTGATAGATATATCAATGTTTGTCCTGTATGCCAATTGATGAAAACTCAAAGTGTCCAGGTGTATCTGTCTTAA 999 0.4094 MLGRKNVLDEARFQYQTNEANQLQLFGNIQAGCNIDPVSYVGNEYLSSMFRSNKRSRAAEDISKQQKLQISLNYNVCQDKADRLANSPNPNQVSTGLRLSYDDDERNSSVTSASGSMTAASSIILSLGDNFRTELDRQQEELDQYIQLQKDQLSKAVRDMKQKHMTSVFNAIEKGVSKKLREKDAEIENINQKNRELAERIKQVSIEAQSWHYKAKYNEQVVNVLRNNLQQAITQGEEQGKEGFGDSSEVDDATSYIDLNSLISNPGARMKSTLKEHQGIENLMCRACRAKEVSMLLMPCRHLCLCDNCDRYINVCPVCQLMKTQSVQVYLS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04905 332 Pfam Zinc finger, C3HC4 type (RING finger) 282 320 - -
Arst3g04905 332 MobiDBLite consensus disorder prediction 83 98 - -
Arst3g04905 332 MobiDBLite consensus disorder prediction 83 114 - -
Arst3g04905 332 PIRSF SBP1_RNase_bind 2 332 IPR017066 -
Arst3g04905 332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 266 332 IPR013083 -
Arst3g04905 332 Coils Coil 180 207 - -
Arst3g04905 332 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 42 329 IPR017066 -
Arst3g04905 332 ProSiteProfiles Zinc finger RING-type profile. 285 320 IPR001841 -
Arst3g04905 332 CDD mRING-HC-C3HC5_CGRF1-like 284 319 - -
Arst3g04905 332 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 267 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04905 Arst-Chr3 124852411 124856265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04905 281 330 C3H Transcription Factor Family AT1G73950 40.000 5.97e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04905 K19042 - mnt:21410357 476.478