Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04900 ATGGAAAATGTGCAAAATAGTATACAATTGGTTCTCTCAACTGATGCAAAGCCAAGTCTCAAATGGACTCCTGAACTTCACCAAAGATTCATTGAGGCAATTAATCAGCTTGGAGGTTCAGAAAATTGCAGAGAATTGAAGAACAGTGAAGGTCCTTGTAGCAGCAGGGAAGAAAGTATTGGGACACAGAATGAGATGACTGAAAGCATGCAAATTGCTGAGGCTCTCCAAATGCAAATGGAAGTACAGAAGAAACTTGATGAGCAAATTGAGGTGCAGAGACATTTGAAGCTTAAAATTGAAGCACAAGTGAAGTACTTGCAATCATAA 330 0.3909 MENVQNSIQLVLSTDAKPSLKWTPELHQRFIEAINQLGGSENCRELKNSEGPCSSREESIGTQNEMTESMQIAEALQMQMEVQKKLDEQIEVQRHLKLKIEAQVKYLQS 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04900 109 Pfam MYB-CC type transfactor, LHEQLE motif 70 109 IPR025756 -
Arst3g04900 109 Gene3D - 16 105 - -
Arst3g04900 109 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 57 109 IPR044848 GO:0003700
Arst3g04900 109 MobiDBLite consensus disorder prediction 43 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04900 Arst-Chr3 124823565 124824377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04900 10 109 G2-like Transcription Factor Family AT4G13640 38.095 1.85e-22 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst3g04900 Myb_CC_LHEQLE 1.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04900 - - adu:107481135 215.698