Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04883 ATGAAAGTCCCAGCAATGGAAAAGAAACTAGTCTCTCTTGTCTATCCCCAGATCCTTGTTTTCCTCCTCATCAAATCTCTGTTACTGTTAGATTCAGTGGTAGCAGAACCAAGGGCCAAAACAGTTGAAGTAACATGTGGCCATCAACTAGAGCACAACACTACCATCTTTGTTCCGAATTTCATTGCAACCATGGAGAAGATAAGCCAACAAATGCGCAGTACCGGCTACGGCACAGCAGTTACAGGGACAGGACCAGACATAGACTATGGCCTGGCACAGTGCTATGGAGATCTTTCACTTCTTGATTGTGTGTTATGTTATGCCGAGGCACGCACGGTTCTTCCTAAATGCTTCCCAAACAATGGTGGCCGCATATTTCTTGATGGATGCTTCATGAGGTCTGAAAATTATAGCTTCTTTGATGAGTATGCAGGGCCAGGGGACAAGGCTGTTTGTGGCAACAAAACTAGGAAGAACTCGAGTTTTCAAGCGGCCGCGAAGCAGGCGGTTTTGGAAGTAGTGCAAGCTGCACCAAACAGCAAAGGATACTATGCAAGAGGGAAGGTTGATGTTTCTGGAAGGGTAAATGAATCTGCTTATGTTTTGGCTAATTGTTGGAAGAGTTTGAACAGTAGTTCTTGCAAAGTATGTCTTGAGAATGCTTCTAAATCTGTGTTGAAATGCTTGCCTTCTTCAGAAGGTAGAGCACTGAACACTGGCTGCTTCATGAGGTATTCTGACACAGATTTTCTTAACAAGGAGCAGAATAATGGAAGATCAAGAGGTACTCTTATAGTGATAGTGGTTGCAGTAGTTAGTGCAGTGATTGTTTTGGTAGTTGGAATAGCTATTGGGGTCTATATAAGGAAAGATAGATACATTCAAAGAAAAAGAAGAGGTTCAAATGATGCAGAGAAGTTGGCTAAGACACTTCACCGCAACAGCTTGAATTTCAAGTACTCTACACTGGAGAAGGCTACCAACTCCTTCAACGAAGCGAACAAGCTTGGACAGGGAGGATTTGGATCGGTTTATAGAGGTGTTCTGCCTGATGGAAGAGAAATTGCCATCAAGAGGTTGTACTTCAACAACAGGCATAGAGCAGCAGATTTCTACAATGAAGTCAACATAATTAGTAGCGTGGAGCACAAGAATCTAGTGAGGTTGTTAGGATGCAGCTGTTCTGGACCCGAAAGCTTGCTCGTATATGAATTTCTACCGAACAAAAGTCTTGATCAATTTATTTTTGATAGAGTCAAGGGAAGAGAACTAAACTGGGAGAAGAGATATGACATTATCATTGGGACAGCTGAAGGATTGGTTTACCTGCATGAGAATTCAAAAACTAGGATAATTCATAGAGATATAAAAGCCAGCAACATCTTACTGGATGCTAAACTTCGCGCCAAAATTGCTGATTTTGGACTGGCCAGGTCCTTTCAAGAAGATAAGAGTCACATTAGCACGGCTATAGCCGGAACTCTGGGTTACATGGCTCCAGAGTACCTAGCTCATGGTCAGTTAACAGAAAAGGCAGATGTATATAGTTTTGGAGTGTTAGTCTTAGAAATAGTTACTGGGAGACAGAATAACAGAAGCAAATCAACAGAATACTCAGACAGCATAGTTATACTGACATGGAGGCATTTCCAATCAGGGACAGCAGAAGAGCTATTTGATCCAAATCTAGCTTCAGATGACAACAATAATGTTAATAAGAAGGATGAGATTTTAAGAGTGGTGCACATAGGACTTCTATGCACACAAGAGAACCCTTCCCTGAGGCCAACCATGTCAAGGGCACTACAGATGCTAACAAAGAAGGAAGAGAATCTTGCACGTCCCTCTAATCCACCCTTCACAGATGAGAACACAATGGAACTCAATGACACTGTTGATAACCCATTTTGCCCTCTCAATAATGCAACATATTCATCAGAGGCTACTATGTCCCATAGTTCTTTCTATGCAAGGTGA 1980 0.4217 MKVPAMEKKLVSLVYPQILVFLLIKSLLLLDSVVAEPRAKTVEVTCGHQLEHNTTIFVPNFIATMEKISQQMRSTGYGTAVTGTGPDIDYGLAQCYGDLSLLDCVLCYAEARTVLPKCFPNNGGRIFLDGCFMRSENYSFFDEYAGPGDKAVCGNKTRKNSSFQAAAKQAVLEVVQAAPNSKGYYARGKVDVSGRVNESAYVLANCWKSLNSSSCKVCLENASKSVLKCLPSSEGRALNTGCFMRYSDTDFLNKEQNNGRSRGTLIVIVVAVVSAVIVLVVGIAIGVYIRKDRYIQRKRRGSNDAEKLAKTLHRNSLNFKYSTLEKATNSFNEANKLGQGGFGSVYRGVLPDGREIAIKRLYFNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDQFIFDRVKGRELNWEKRYDIIIGTAEGLVYLHENSKTRIIHRDIKASNILLDAKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLVLEIVTGRQNNRSKSTEYSDSIVILTWRHFQSGTAEELFDPNLASDDNNNVNKKDEILRVVHIGLLCTQENPSLRPTMSRALQMLTKKEENLARPSNPPFTDENTMELNDTVDNPFCPLNNATYSSEATMSHSSFYAR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04883 659 ProSiteProfiles Gnk2-homologous domain profile. 39 140 IPR002902 -
Arst3g04883 659 SUPERFAMILY Protein kinase-like (PK-like) 315 627 IPR011009 -
Arst3g04883 659 ProSiteProfiles Gnk2-homologous domain profile. 145 251 IPR002902 -
Arst3g04883 659 Gene3D - 150 251 IPR038408 -
Arst3g04883 659 Gene3D - 39 140 IPR038408 -
Arst3g04883 659 FunFam Cysteine-rich receptor-like protein kinase 2 39 140 - -
Arst3g04883 659 Gene3D Phosphorylase Kinase; domain 1 292 406 - -
Arst3g04883 659 Pfam Salt stress response/antifungal 153 248 IPR002902 -
Arst3g04883 659 Pfam Salt stress response/antifungal 56 138 IPR002902 -
Arst3g04883 659 ProSiteProfiles Protein kinase domain profile. 331 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04883 659 CDD STKc_IRAK 337 608 - -
Arst3g04883 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Arst3g04883 659 FunFam Cysteine-rich receptor-like protein kinase 3 149 251 - -
Arst3g04883 659 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 631 - -
Arst3g04883 659 Pfam Protein tyrosine and serine/threonine kinase 334 604 IPR001245 GO:0004672|GO:0006468
Arst3g04883 659 SMART serkin_6 331 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04883 659 FunFam Cysteine-rich receptor-like protein kinase 2 407 614 - -
Arst3g04883 659 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Arst3g04883 659 Gene3D Transferase(Phosphotransferase) domain 1 407 617 - -
Arst3g04883 659 FunFam Putative DUF26-domain receptor-like protein kinase family protein 299 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04883 Arst-Chr3 124650999 124654618 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04883 10 659 Receptor kinase-like Gene Family AT1G70520 66.769 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst3g04883 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04883 - - aip:107631343 1264.98