Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04858 ATGGAAGAAGCGTTTAGGCGTCTCAACGGCATGCCTCCNTACGCGGCGGAGATAAGGGACCCGCAGTCGAAGGAGCGGCGGTGGCTGGGGACGTTCGACACGGCGGAGGAAGCTGCCTGCGCCTACGACTGTGCCGCCAGAGCGATGCGAGGCGCGAAGGCGAGGACGAACTTCGTGTACCCTGATTCTCCTCCTCATCCTCGTCCACACCATCACCATCACAATTTTCGTCACTCTGAACTGTTCCAAGCGTTCAACTTCCCGAAGCAGCAGTGCCACGTCAGCAAGTTAGTTCAGAGTGGCCGCCATGGCGTAACTGCTCCATTATCGACTCAGCAGCAGCACCGAAACGTCGCTAACAATTCTCATCATTCCCTGAACATGCTTCTGTTCCGCGAGTTTCTGAATTCGAATCCGTGTTTGGTTTCTTCTTCTTCTGCTGCTGCTGGTGGTGTTGGTTCTAGTAGTGCTAATAATAGTCCTTATCAGTATTGCATGAAGGAGGGTGGTTCCGCTTGCTGCTTCAATGGTAACTGTTGCGGTGGTGGTTCCAACAACGGCACGACGGAGGTTATTGCTGAAGGTGTCGAGGAAGAAGATCAGTCGTTATTGGAGTTGTTCCCTAGAGAGTCTTCAAACTCTGGTCTGTTGGAAGAGATAGTTCAACGCTTCTTGCCGAAATCCAAAACCGTTCCAAACAAGAATTGCGACAGCACTTTGAAGCTGAAACCCGAGGCGGCGGCAGTTTCGTTTCCTCATCATCAACAACAACAACAACAGGGCTATGATGATGACAGCAGGATGATGAGGGGTTTTGATCATCAAAATTTTCCTGTTCAGCAATTTGATTATGGCTTTAACCCTATTCATGAGGCCTCATCGATGACCATGCCTGTGGGGAACGAACAGTTGATGATGAACCCTACTGCTATGCTGGAAGATGCTTTTCAGTATCAACAATTTCTCAATGCCTTCGCGGCCAGAATGCAGAATGCTTAA 999 0.5015 MEEAFRRLNGMPPYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGAKARTNFVYPDSPPHPRPHHHHHNFRHSELFQAFNFPKQQCHVSKLVQSGRHGVTAPLSTQQQHRNVANNSHHSLNMLLFREFLNSNPCLVSSSSAAAGGVGSSSANNSPYQYCMKEGGSACCFNGNCCGGGSNNGTTEVIAEGVEEEDQSLLELFPRESSNSGLLEEIVQRFLPKSKTVPNKNCDSTLKLKPEAAAVSFPHHQQQQQQGYDDDSRMMRGFDHQNFPVQQFDYGFNPIHEASSMTMPVGNEQLMMNPTAMLEDAFQYQQFLNAFAARMQNA 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04858 332 CDD AP2 6 58 IPR001471 GO:0003700|GO:0006355
Arst3g04858 332 ProSiteProfiles AP2/ERF domain profile. 1 59 IPR001471 GO:0003700|GO:0006355
Arst3g04858 332 SMART rav1_2 6 65 IPR001471 GO:0003700|GO:0006355
Arst3g04858 332 SUPERFAMILY DNA-binding domain 12 59 IPR016177 GO:0003677
Arst3g04858 332 Gene3D AP2/ERF domain 6 60 IPR036955 GO:0003700|GO:0006355
Arst3g04858 332 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 14 205 - -
Arst3g04858 332 Pfam AP2 domain 15 51 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04858 Arst-Chr3 124383230 124384228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04858 14 229 AP2-EREBP Transcription Factor Family AT1G12980 37.500 3.64e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04858 - - adu:107481147 604.364