Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04850 ATGGAAGATGAGAACTTTGACCCTGCAACCTCAAGCCTTCTGTGTCTGGAAAACAATAACACATGCTTTGATGATTTTGAATGTAGTGCCGCAGATGGGTACCACAAAAAACTTAACTTTAACGATGATGGATCGGAACCATTCGTGGGGTTTCTGGTGCTGAGTGATGAAACTTTTGGGGTTATGGTTGAGAAGGAGATAGAGTTTTTGCCCACTGATGATTACCTCAGGAGGATCCTTGGTGGGGATTTGGACTTTGGTGTTAGGAGGGATGCTCTTGATTGGATTTGTAAGGCTCATGCTTATTATGGTTTTGGACCCAGTTGCTTTTGTCTATCTGTGAACTACTTGGATCGGTTCCTATCAGTACGTGATATTCCAAGAGACAAAAGAAATTGGGCTGTGCAGTTGTTAGCTTTAGCTTGTTTATCAATTGCAGCTAAGATGGAAGAGACTAAAATGCCCCATGTTATAGATATGCAGGATGACGAAACAACAGCTGTGTTTGATGCTAAAACTATTCAAAGAATGGAACTGATGATATTAACCACACTGAGTTGGAAAATGCAAGCCTTAACTCCGTGTTCCTTTATGGACTACTTCCTTGGCAAGATCACTCGTGAGCAGCATCTGGCAAAGTCATTGGTTTTGAGATCAATGGAGCTCATAGTTCAAATTATCAGATATGTTGAATTCTTGGAGTTTCGGCCGTCTGATATTGCCGCAGCAGTTGCGATTTCTGTGTTGAGGGAATCACAAGGAATAGATATTGATAAAGCCTTGAATTGTTTTGTCATCGCGCGGAAGGACAGAGTCTTGAAGTGCATTGAACTGATCAGAGACTTAGCCTTGACAAAAATTCCGGCTAATTCGAATGGCAACTTAGCTCCATTAGCACCGCAAAGCCCCCTCGGGGTGCTCGATGCGACATGCTTGAGCTATAGAAGTGAGGAATCAACAACAGTTGGTGGTTCATTCACAGATTCCTTCCAATATAGTCCAAGAGCTAAGAGGTGTAGATCAGAAAATGGACCTTCTAATGAGAATTTCAGGTCATGA 1059 0.423 MEDENFDPATSSLLCLENNNTCFDDFECSAADGYHKKLNFNDDGSEPFVGFLVLSDETFGVMVEKEIEFLPTDDYLRRILGGDLDFGVRRDALDWICKAHAYYGFGPSCFCLSVNYLDRFLSVRDIPRDKRNWAVQLLALACLSIAAKMEETKMPHVIDMQDDETTAVFDAKTIQRMELMILTTLSWKMQALTPCSFMDYFLGKITREQHLAKSLVLRSMELIVQIIRYVEFLEFRPSDIAAAVAISVLRESQGIDIDKALNCFVIARKDRVLKCIELIRDLALTKIPANSNGNLAPLAPQSPLGVLDATCLSYRSEESTTVGGSFTDSFQYSPRAKRCRSENGPSNENFRS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04850 352 CDD CYCLIN_AtCycD-like_rpt2 193 279 - -
Arst3g04850 352 PANTHER CYCLINS 56 281 IPR039361 -
Arst3g04850 352 SMART cyclin_7 94 183 IPR013763 -
Arst3g04850 352 Pfam Cyclin, N-terminal domain 59 189 IPR006671 -
Arst3g04850 352 SUPERFAMILY Cyclin-like 52 189 IPR036915 -
Arst3g04850 352 Gene3D - 62 277 - -
Arst3g04850 352 MobiDBLite consensus disorder prediction 320 336 - -
Arst3g04850 352 Gene3D - 72 190 - -
Arst3g04850 352 FunFam D6-type cyclin 186 277 - -
Arst3g04850 352 SMART Cyclin_C_2 192 301 IPR004367 -
Arst3g04850 352 Pfam Cyclin, C-terminal domain 193 285 IPR004367 -
Arst3g04850 352 ProSitePatterns Cyclins signature. 89 120 IPR006671 -
Arst3g04850 352 CDD CYCLIN_AtCycD-like_rpt1 88 187 - -
Arst3g04850 352 MobiDBLite consensus disorder prediction 320 352 - -
Arst3g04850 352 FunFam D6-type cyclin 72 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04850 Arst-Chr3 124237518 124239997 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04850 34 321 Core Cell Cycle Gene Families AT2G22490 47.492 5.43e-85 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04850 K18810 - gmx:100800570 370.163