Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04831 ATGCACTCTCACTCCCTCCTTTCAATGGAAACGCTCACCACCTCCTCCTCCATCTACCATCAATCTCTGCCTCCTACTCCTCCTCCTCATTACTACTTCCTCTACGCCAACGGGACCACTGACCTCAAGCCTGAGGGACTCGACGGTACTTCCCAACTGGATCATAACATCATGTCCCAACAACCTTCTTTCTTCATCAACCCAAACCTTCAGCCACCACAACCCCTCCTGCCAAAGCTCGAATATTTCTTTCAAACCGACAGAAATGATGATGATGATTCCTCTTCCCTCACCCAAGATCTGAAAGCGCTTGCTGCTGACGCTGCCTTCCTAGCTTTCTCCTCTGCCAATTCGGTCTCTCAGGTGCTGGATGCTCACTCATCCCGGAACGATGACTTCGCGTTCTCCGCTAGTAAAGGCGGTAACTCCTCCAACTCCAAGAAGGTTGTTGGTGATACATTTGGCCAGCGAACTTCAATATACAGAGGTGTTACCAGACACCGATGGACGGGACGATATGAAGCTCACCTGTGGGATAATAGCTGCCGCCGAGAGGGTCAAGCCAGGAAAGGCCGTCAAGTATATTTGGGTGGATATGACAAGGAAGAAAAGGCCGCAAGAGCCTATGATTTGGCAGCTCTAAAGTACTGGGGCCCCACAGCTACCACTAACTTCCCTGTTTCTAATTATATAAAGGAATTGGAAGAGATGAAAGATGTAGGGAAGCTTGAATTTATTGCATCACTACGAAGGAGAAGTAGTGGTTTCTCCAGGGGAGCTTCCATATACAGGGGTGTTACAAGGCATCATCAACAAGGTAGATGGCAAGCGAGAATAGGCCGCGTTACAGGGAACAAAGATCTATACCTAGGGACATTTGCAAGTGAAGAGGAAGCGGCGGAGGCATACGATATTGCGGCAATAAAGTTCAGAGGGTTAAATGCAGTAACCAATTTTGAGACGAGTAGGTACAACGTGGAAGCCATAATGAATAATTCTCTTCCCGTTGGCGGGGTAGCCAAACGGTTGAGGCTTTCCCTAGAATCAGAGAAGGAAGAAGCTGCTACTTCTACTACTAATACTCACCAGCCACCTAAGACTGAGAGTGAGAGTAGCATCATGACATTGTCAACCATTCCGGCTCCTCCTGCACACTTTGATTCTGTGACACCATATTGCTACCAATTTCATTCCCCCGATGCCGTTAACGATGCCATCATGCCAATGTAA 1230 0.4813 MHSHSLLSMETLTTSSSIYHQSLPPTPPPHYYFLYANGTTDLKPEGLDGTSQLDHNIMSQQPSFFINPNLQPPQPLLPKLEYFFQTDRNDDDDSSSLTQDLKALAADAAFLAFSSANSVSQVLDAHSSRNDDFAFSASKGGNSSNSKKVVGDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEEKAARAYDLAALKYWGPTATTNFPVSNYIKELEEMKDVGKLEFIASLRRRSSGFSRGASIYRGVTRHHQQGRWQARIGRVTGNKDLYLGTFASEEEAAEAYDIAAIKFRGLNAVTNFETSRYNVEAIMNNSLPVGGVAKRLRLSLESEKEEAATSTTNTHQPPKTESESSIMTLSTIPAPPAHFDSVTPYCYQFHSPDAVNDAIMPM 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04831 409 Pfam AP2 domain 262 312 IPR001471 GO:0003700|GO:0006355
Arst3g04831 409 Pfam AP2 domain 160 218 IPR001471 GO:0003700|GO:0006355
Arst3g04831 409 SUPERFAMILY DNA-binding domain 159 228 IPR016177 GO:0003677
Arst3g04831 409 SUPERFAMILY DNA-binding domain 261 321 IPR016177 GO:0003677
Arst3g04831 409 FunFam AP2-like ethylene-responsive transcription factor 261 322 - -
Arst3g04831 409 MobiDBLite consensus disorder prediction 352 371 - -
Arst3g04831 409 CDD AP2 261 322 IPR001471 GO:0003700|GO:0006355
Arst3g04831 409 ProSiteProfiles AP2/ERF domain profile. 160 226 IPR001471 GO:0003700|GO:0006355
Arst3g04831 409 PRINTS Ethylene responsive element binding protein signature 161 172 IPR001471 GO:0003700|GO:0006355
Arst3g04831 409 PRINTS Ethylene responsive element binding protein signature 302 322 IPR001471 GO:0003700|GO:0006355
Arst3g04831 409 FunFam AP2-like ethylene-responsive transcription factor ANT 159 228 - -
Arst3g04831 409 ProSiteProfiles AP2/ERF domain profile. 262 320 IPR001471 GO:0003700|GO:0006355
Arst3g04831 409 CDD AP2 159 228 IPR001471 GO:0003700|GO:0006355
Arst3g04831 409 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 128 368 - -
Arst3g04831 409 Gene3D AP2/ERF domain 160 228 IPR036955 GO:0003700|GO:0006355
Arst3g04831 409 Gene3D AP2/ERF domain 262 322 IPR036955 GO:0003700|GO:0006355
Arst3g04831 409 SMART rav1_2 160 232 IPR001471 GO:0003700|GO:0006355
Arst3g04831 409 SMART rav1_2 262 326 IPR001471 GO:0003700|GO:0006355
Arst3g04831 409 MobiDBLite consensus disorder prediction 350 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04831 Arst-Chr3 124090447 124093946 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04831 100 342 AP2-EREBP Transcription Factor Family AT5G57390 71.193 7.96e-121 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Arst3g04831 AP2 7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04831 K09285 - gmx:100777168 371.318