Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04830 ATGCACTCTCACTCCCTCCTTTCAATGGAAACGCTCACCACCTCCTCCTCCATCTACCATCAATCTCTGCCTCCTACTCCTCCTCCTCATTACTACTTCCTCTACGCCAACGGGACCACTGACCTCAAGCCTGAGGGACTCGACGGTACTTCCCAACTGGATCATAACATCATGTCCCAACAACCTTCTTTCTTCATCAACCCAAACCTTCAGCCACCACAACCCCTCCTGCCAAAGCTCGAATATTTCTTTCAAACCGACAGAAATGATGATGATGATTCCTCTTCCCTCACCCAAGATCTGAAAGCGCTTGCTGCTGACGCTGCCTTCCTAGCTTTCTCCTCTGCCAATTCGGTCTCTCAGGTGCTGGATGCTCACTCATCCCGGAACGATGACTTCGCGTTCTCCGCTAGTAAAGGCGGTAACTCCTCCAACTCCAAGAAGGTTGTTGGTGATACATTTGGCCAGCGAACTTCAATATACAGAGGTGTTACCAGACACCGATGGACGGGACGATATGAAGCTCACCTGTGGGATAATAGCTGCCGCCGAGAGGGTCAAGCCAGGAAAGGCCGTCAAGTATATTTGGGTGGATATGACAAGGAAGAAAAGGCCGCAAGAGCCTATGATTTGGCAGCTCTAAAGTACTGGGGCCCCACAGCTACCACTAACTTCCCTGTTTCTAATTATATAAAGGAATTGGAAGAGATGAAAGATGTAGGGAAGCTTGAATTTATTGCATCACTACGAAGGAGAAGTAGTGGTTTCTCCAGGGGAGCTTCCATATACAGGGGTGTTACAAGCAGGCATCATCAACAAGGTAGATGGCAAGCGAGAATAGGCCGCGTTACAGGGAACAAAGATCTATACCTAGGGACATTTGCAAGTGAAGAGGAAGCGGCGGAGGCATACGATATTGCGGCAATAAAGTTCAGAGGGTTAAATGCAGTAACCAATTTTGAGACGAGTAGGTACAACGTGGAAGCCATAATGAATAATTCTCTTCCCGTTGGCGGGGTAGCCAAACGGTTGAGGCTTTCCCTAGAATCAGAGAAGGAAGAAGCTGCTACTTCTACTACTAATACTCACCAGCCACCTAAGACTGAGAGTGAGAGTAGCATCATGACATTGTCAACCATTCCGGCTCCTCCTGCACACTTTGATTCTGTGACACCATATTGCTACCAATTTCATTCCCCCGATGCCGTTAACGATGCCATCATGCCAATGTAA 1233 0.4818 MHSHSLLSMETLTTSSSIYHQSLPPTPPPHYYFLYANGTTDLKPEGLDGTSQLDHNIMSQQPSFFINPNLQPPQPLLPKLEYFFQTDRNDDDDSSSLTQDLKALAADAAFLAFSSANSVSQVLDAHSSRNDDFAFSASKGGNSSNSKKVVGDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEEKAARAYDLAALKYWGPTATTNFPVSNYIKELEEMKDVGKLEFIASLRRRSSGFSRGASIYRGVTSRHHQQGRWQARIGRVTGNKDLYLGTFASEEEAAEAYDIAAIKFRGLNAVTNFETSRYNVEAIMNNSLPVGGVAKRLRLSLESEKEEAATSTTNTHQPPKTESESSIMTLSTIPAPPAHFDSVTPYCYQFHSPDAVNDAIMPM 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04830 410 PRINTS Ethylene responsive element binding protein signature 161 172 IPR001471 GO:0003700|GO:0006355
Arst3g04830 410 PRINTS Ethylene responsive element binding protein signature 303 323 IPR001471 GO:0003700|GO:0006355
Arst3g04830 410 SUPERFAMILY DNA-binding domain 159 228 IPR016177 GO:0003677
Arst3g04830 410 SUPERFAMILY DNA-binding domain 261 322 IPR016177 GO:0003677
Arst3g04830 410 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 128 369 - -
Arst3g04830 410 FunFam AP2-like ethylene-responsive transcription factor 261 323 - -
Arst3g04830 410 Pfam AP2 domain 160 218 IPR001471 GO:0003700|GO:0006355
Arst3g04830 410 Pfam AP2 domain 263 313 IPR001471 GO:0003700|GO:0006355
Arst3g04830 410 ProSiteProfiles AP2/ERF domain profile. 160 226 IPR001471 GO:0003700|GO:0006355
Arst3g04830 410 ProSiteProfiles AP2/ERF domain profile. 262 321 IPR001471 GO:0003700|GO:0006355
Arst3g04830 410 SMART rav1_2 160 232 IPR001471 GO:0003700|GO:0006355
Arst3g04830 410 SMART rav1_2 262 327 IPR001471 GO:0003700|GO:0006355
Arst3g04830 410 FunFam AP2-like ethylene-responsive transcription factor ANT 159 228 - -
Arst3g04830 410 Gene3D AP2/ERF domain 262 323 IPR036955 GO:0003700|GO:0006355
Arst3g04830 410 Gene3D AP2/ERF domain 160 228 IPR036955 GO:0003700|GO:0006355
Arst3g04830 410 MobiDBLite consensus disorder prediction 353 372 - -
Arst3g04830 410 CDD AP2 159 228 IPR001471 GO:0003700|GO:0006355
Arst3g04830 410 MobiDBLite consensus disorder prediction 350 372 - -
Arst3g04830 410 CDD AP2 261 323 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04830 Arst-Chr3 124090446 124093946 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04830 100 343 AP2-EREBP Transcription Factor Family AT5G57390 70.902 4.24e-119 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Arst3g04830 AP2 7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04830 K09285 - gmx:100777168 366.696