Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04814 ATGGTGGAGCTTTCATTTTTAAGGGCATGGACAGCTTCCATGGAGGGCTCAAATGTCCCCATTAATATAGACATAAGGTACATTTTGCGAAGAGGTGATTCAGGATTTTATTCATATGCAATATTTGATCGGCCTGATGAAGGATTTCCAGGCGTGGAGGTTGATCAAATTAGATTTGTTTATAAGCTCTTGAAAGATAGATTCAGCTATATGGCTCTATCTAGTACAAGACAAAGAACTATGCCAACAATGAGAGACAGAGAAACAGGACAAATCCTGGCTTACCCTGAAGCCGTTCTTTTAACGAAACCAAGCAACCCTCAATTTAGAGGAGAGGTGGATGACAAATACCAATACTCATGTGAGAACAGTGAAAACAATGTTCATGGATGGATTAGCCTTCAGCCTGATGAACCGGTGGGTTTCTGGATAATTACTCCTTCCAATGAGTTCCGCAATGGTGGCCCCATCAAGCAAGACCTCACTTCTCACGTTGGCCCCTTCACTCTTTCTATGTTTGTCAGCACTCACTATGCCGGCAAAGAAGTAACCATGTCTTTCCAACAAGGCGACACTTATAAAAAGGTTTTTGGACCTGTTTTTGTCTATCTTAACTCTGCTTCAATCTCCGATGATCCCTTGTCTCTCTGGTCAGATGCTATTAACCAGCTCTCCAAAGAAGTCAAAGCCTGGCCTTACGATTTTCCACTATCACCAGATTACTTTCCACCCGATCAACGAGGAATAGTGTTAGGAAGATTGTTAGTCCAAGATTGGTGTGTTAAGGGTGGGAGATTGCAGTATGCTAACAATGCTTATGTTGGCCTAGCATTACCTGGAGATGCAGGATCATGGCAGAAAGAGAGCAAGGGTTACCAATTTTGGACTCAAGCTGATTCCAAAGGATACTTTGCAATTAAAAATGTTGTACCTGGGGATTATAACTTGTATGCTTGGGTACCTGGCTTTATTGGTGATTACAAATATAATTCTACAATCACAATAACACCAGGAGGAGTCATCAAATTGGATCAACTTGTATATAGTCCTCCTAGAAATGGACCAACCATATGGGAAATTGGTATCCCAGACAGAACAGCTGTAGAGTTCTACGTACCAGATCCTTACCCTACTCTCATGAACAAATTATACACTGAACAACGCAAAGACAAGTTTAGGCAATATGGGTTGTGGGAACGTTATTCTGACATGTATCCAAATGAAGATCTTGTTTACACTGTTGGTGTCAACAAGTACAATAGGGATTGGTTTTATGCCCATGTTACAAGGAATATGGGGAATAAGACATACGAACCAACAACGTGGCAAATTATATTTGAACATCGCAATGACATAATAGAAGGGAATTACACACTACAATTAGCCCTAGCATCTGCTGCTGATGCTGAACTTCAGGTTCGATTCAATGATCCAAGTGTTTATCCTGCCCACTTTGGAACAGGGCCAATAGGAGGAGATAATGCCATAGCAAGACATGGAATCCATGGATTGCATAGGCTGTATAGTATTGATGTGCCTAGTCATCATTTTGTGAAAGGAAAGAATATCATTTATCTGAGACAGTCTAGAGCTATAAACCAATTTCAAGGAGTTATGTATGATTATATCCGTTTAGAAAGACCACCAAACTCAACCAATTGA 1662 0.4067 MVELSFLRAWTASMEGSNVPINIDIRYILRRGDSGFYSYAIFDRPDEGFPGVEVDQIRFVYKLLKDRFSYMALSSTRQRTMPTMRDRETGQILAYPEAVLLTKPSNPQFRGEVDDKYQYSCENSENNVHGWISLQPDEPVGFWIITPSNEFRNGGPIKQDLTSHVGPFTLSMFVSTHYAGKEVTMSFQQGDTYKKVFGPVFVYLNSASISDDPLSLWSDAINQLSKEVKAWPYDFPLSPDYFPPDQRGIVLGRLLVQDWCVKGGRLQYANNAYVGLALPGDAGSWQKESKGYQFWTQADSKGYFAIKNVVPGDYNLYAWVPGFIGDYKYNSTITITPGGVIKLDQLVYSPPRNGPTIWEIGIPDRTAVEFYVPDPYPTLMNKLYTEQRKDKFRQYGLWERYSDMYPNEDLVYTVGVNKYNRDWFYAHVTRNMGNKTYEPTTWQIIFEHRNDIIEGNYTLQLALASAADAELQVRFNDPSVYPAHFGTGPIGGDNAIARHGIHGLHRLYSIDVPSHHFVKGKNIIYLRQSRAINQFQGVMYDYIRLERPPNSTN 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04814 553 SUPERFAMILY Galactose-binding domain-like 353 546 IPR008979 -
Arst3g04814 553 SUPERFAMILY Galactose mutarotase-like 27 212 IPR011013 GO:0003824|GO:0005975|GO:0030246
Arst3g04814 553 Pfam Rhamnogalacturonate lyase family 2 113 IPR010325 -
Arst3g04814 553 CDD RGL4_N 1 208 - -
Arst3g04814 553 CDD RGL4_M 246 343 IPR029413 -
Arst3g04814 553 SUPERFAMILY Starch-binding domain-like 242 345 IPR013784 GO:0030246
Arst3g04814 553 Gene3D - 12 224 IPR014718 GO:0030246
Arst3g04814 553 Gene3D - 246 344 - -
Arst3g04814 553 Pfam Polysaccharide lyase family 4, domain II 270 342 IPR029413 -
Arst3g04814 553 CDD RGL4_C 358 546 - -
Arst3g04814 553 Gene3D - 353 546 - -
Arst3g04814 553 Pfam Polysaccharide lyase family 4, domain III 356 545 IPR029411 -
Arst3g04814 553 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 2 549 - -
Arst3g04814 553 FunFam Rhamnogalacturonate lyase B 243 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04814 Arst-Chr3 123791797 123794896 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04814 2 550 Polysaccharide Lyase AT1G09910 56.443 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04814 K18195 - gmx:100776664 927.161