Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04812 ATGTCATTGGTGTATCCTATAACGGAATTGAGAATGTACTTGAACCTCAAAATGAAGAACAAGATAGAGGGAAAACCCAGTATCTTTCAAAGAATCCACGGGACAAATTTTTCGGTTATAGCTTCTGACGAGAATATGGTGGAGCTTTCATTTTTAAGGGCATGGACAGCTTCCATGGAGGGCTCAAATGTCCCCATTAATATAGACATAAGGTACATTTTGCGAAGAGGTGATTCAGGATTTTATTCATATGCAATATTTGATCGGCCTGATGAAGGATTTCCAGGCGTGGAGGTTGATCAAATTAGATTTGTTTATAAGCTCTTGAAAGATAGATTCAGCTATATGGCTCTATCTAGTACAAGACAAAGAACTATGCCAACAATGAGAGACAGAGAAACAGGACAAATCCTGGCTTACCCTGAAGCCGTTCTTTTAACGAAACCAAGCAACCCTCAATTTAGAGGAGAGGTGGATGACAAATACCAATACTCATGTGAGAACAGTGAAAACAATGTTCATGGATGGATTAGCCTTCAGCCTGATGAACCGGTGGGTTTCTGGATAATTACTCCTTCCAATGAGTTCCGCAATGGTGGCCCCATCAAGCAAGACCTCACTTCTCACGTTGGCCCCTTCACTCTTTCTATGTTTGTCAGCACTCACTATGCCGGCAAAGAAGTAACCATGTCTTTCCAACAAGGCGACACTTATAAAAAGGTTTTTGGACCTGTTTTTGTCTATCTTAACTCTGCTTCAATCTCCGATGATCCCTTGTCTCTCTGGTCAGATGCTATTAACCAGCTCTCCAAAGAAGTCAAAGCCTGGCCTTACGATTTTCCACTATCACCAGATTACTTTCCACCCGATCAACGAGGAATAGTGTTAGGAAGATTGTTAGTCCAAGATTGGTGTGTTAAGGGTGGGAGATTGCAGTATGCTAACAATGCTTATGTTGGCCTAGCATTACCTGGAGATGCAGGATCATGGCAGAAAGAGAGCAAGGGTTACCAATTTTGGACTCAAGCTGATTCCAAAGGATACTTTGCAATTAAAAATGTTGTACCTGGGGATTATAACTTGTATGCTTGGGTACCTGGCTTTATTGGTGATTACAAATATAATTCTACAATCACAATAACACCAGGAGGAGTCATCAAATTGGATCAACTTGTATATAGTCCTCCTAGAAATGGACCAACCATATGGGAAATTGGTATCCCAGACAGAACAGCTGTAGAGTTCTACGTACCAGATCCTTACCCTACTCTCATGAACAAATTATACACTGAACAACGCAAAGACAAGTTTAGGCAATATGGGTTGTGGGAACGTTATTCTGACATGTATCCAAATGAAGATCTTGTTTACACTGTTGGTGTCAACAAGTACAATAGGGATTGGTTTTATGCCCATGTTACAAGGAATATGGGGAATAAGACATACGAACCAACAACGTGGCAAATTATATTTGAACATCGCAATGACATAATAGAAGGGAATTACACACTACAATTAGCCCTAGCATCTGCTGCTGATGCTGAACTTCAGGTTCGATTCAATGATCCAAGTGTTTATCCTGCCCACTTTGGAACAGGGCCAATAGGAGGAGATAATGCCATAGCAAGACATGGAATCCATGGATTGCATAGGCTGTATAGTATTGATGTGCCTAGTCATCATTTTGTGAAAGGAAAGAATATCATTTATCTGAGACAGTCTAGAGCTATAAACCAATTTCAAGGAGTTATGTATGATTATATCCGTTTAGAAAGACCACCAAACTCAACCAATTGA 1797 0.404 MSLVYPITELRMYLNLKMKNKIEGKPSIFQRIHGTNFSVIASDENMVELSFLRAWTASMEGSNVPINIDIRYILRRGDSGFYSYAIFDRPDEGFPGVEVDQIRFVYKLLKDRFSYMALSSTRQRTMPTMRDRETGQILAYPEAVLLTKPSNPQFRGEVDDKYQYSCENSENNVHGWISLQPDEPVGFWIITPSNEFRNGGPIKQDLTSHVGPFTLSMFVSTHYAGKEVTMSFQQGDTYKKVFGPVFVYLNSASISDDPLSLWSDAINQLSKEVKAWPYDFPLSPDYFPPDQRGIVLGRLLVQDWCVKGGRLQYANNAYVGLALPGDAGSWQKESKGYQFWTQADSKGYFAIKNVVPGDYNLYAWVPGFIGDYKYNSTITITPGGVIKLDQLVYSPPRNGPTIWEIGIPDRTAVEFYVPDPYPTLMNKLYTEQRKDKFRQYGLWERYSDMYPNEDLVYTVGVNKYNRDWFYAHVTRNMGNKTYEPTTWQIIFEHRNDIIEGNYTLQLALASAADAELQVRFNDPSVYPAHFGTGPIGGDNAIARHGIHGLHRLYSIDVPSHHFVKGKNIIYLRQSRAINQFQGVMYDYIRLERPPNSTN 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04812 598 SUPERFAMILY Galactose-binding domain-like 398 591 IPR008979 -
Arst3g04812 598 FunFam Rhamnogalacturonate lyase B 288 388 - -
Arst3g04812 598 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 12 594 - -
Arst3g04812 598 CDD RGL4_C 403 591 - -
Arst3g04812 598 SUPERFAMILY Starch-binding domain-like 287 390 IPR013784 GO:0030246
Arst3g04812 598 Gene3D - 27 269 IPR014718 GO:0030246
Arst3g04812 598 CDD RGL4_N 20 261 - -
Arst3g04812 598 Gene3D - 291 389 - -
Arst3g04812 598 Pfam Polysaccharide lyase family 4, domain II 315 387 IPR029413 -
Arst3g04812 598 Gene3D - 398 591 - -
Arst3g04812 598 Pfam Rhamnogalacturonate lyase family 23 158 IPR010325 -
Arst3g04812 598 CDD RGL4_M 291 388 IPR029413 -
Arst3g04812 598 Pfam Polysaccharide lyase family 4, domain III 401 590 IPR029411 -
Arst3g04812 598 SUPERFAMILY Galactose mutarotase-like 72 257 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04812 Arst-Chr3 123788575 123794896 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04812 24 595 Polysaccharide Lyase AT1G09910 55.749 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04812 K18195 - gmx:100776664 963.755