Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04811 ATGACTATGCAACTCTGCTTCTTCTTCTTGTTGTTGCTTGGTGCCTCCTCTTCTGATAAGACAACATTAAGAAAAAGTTTAAGAAAGAACAACAGTATACAAACACCATCATCTTCCAATTTTGCAGTTAAGCTTAATGAAGAAAATCATCAGCAGTTGGTGATTGACAACGGTATCGTTTCAGTAACTTTATCTATACCAGAAGGTTATGTCATTGGTGTATCCTATAACGGAATTGAGAATGTACTTGAACCTCAAAATGAAGAACAAGATAGAGGGAAAACCCAGTATCTTTCAAAGTGCAGAATCCACGGGACAAATTTTTCGGTTATAGCTTCTGACGAGAATATGGTGGAGCTTTCATTTTTAAGGGCATGGACAGCTTCCATGGAGGGCTCAAATGTCCCCATTAATATAGACATAAGGTACATTTTGCGAAGAGGTGATTCAGGATTTTATTCATATGCAATATTTGATCGGCCTGATGAAGGATTTCCAGGCGTGGAGGTTGATCAAATTAGATTTGTTTATAAGCTCTTGAAAGATAGATTCAGCTATATGGCTCTATCTAGTACAAGACAAAGAACTATGCCAACAATGAGAGACAGAGAAACAGGACAAATCCTGGCTTACCCTGAAGCCGTTCTTTTAACGAAACCAAGCAACCCTCAATTTAGAGGAGAGGTGGATGACAAATACCAATACTCATGTGAGAACAGTGAAAACAATGTTCATGGATGGATTAGCCTTCAGCCTGATGAACCGGTGGGTTTCTGGATAATTACTCCTTCCAATGAGTTCCGCAATGGTGGCCCCATCAAGCAAGACCTCACTTCTCACGTTGGCCCCTTCACTCTTTCTATGTTTGTCAGCACTCACTATGCCGGCAAAGAAGTAACCATGTCTTTCCAACAAGGCGACACTTATAAAAAGGTTTTTGGACCTGTTTTTGTCTATCTTAACTCTGCTTCAATCTCCGATGATCCCTTGTCTCTCTGGTCAGATGCTATTAACCAGCTCTCCAAAGAAGTCAAAGCCTGGCCTTACGATTTTCCACTATCACCAGATTACTTTCCACCCGATCAACGAGGAATAGTGTTAGGAAGATTGTTAGTCCAAGATTGGTGTGTTAAGGGTGGGAGATTGCAGTATGCTAACAATGCTTATGTTGGCCTAGCATTACCTGGAGATGCAGGATCATGGCAGAAAGAGAGCAAGGGTTACCAATTTTGGACTCAAGCTGATTCCAAAGGATACTTTGCAATTAAAAATGTTGTACCTGGGGATTATAACTTGTATGCTTGGGTACCTGGCTTTATTGGTGATTACAAATATAATTCTACAATCACAATAACACCAGGAGGAGTCATCAAATTGGATCAACTTGTATATAGTCCTCCTAGAAATGGACCAACCATATGGGAAATTGGTATCCCAGACAGAACAGCTGTAGAGTTCTACGTACCAGATCCTTACCCTACTCTCATGAACAAATTATACACTGAACAACGCAAAGACAAGTTTAGGCAATATGGGTTGTGGGAACGTTATTCTGACATGTATCCAAATGAAGATCTTGTTTACACTGTTGGTGTCAACAAGTACAATAGGGATTGGTTTTATGCCCATGTTACAAGGAATATGGGGAATAAGACATACGAACCAACAACGTGGCAAATTATATTTGAACATCGCAATGACATAATAGAAGGGAATTACACACTACAATTAGCCCTAGCATCTGCTGCTGATGCTGAACTTCAGGTTCGATTCAATGATCCAAGTGTTTATCCTGCCCACTTTGGAACAGGGCCAATAGGAGGAGATAATGCCATAGCAAGACATGGAATCCATGGATTGCATAGGCTGTATAGTATTGATGTGCCTAGTCATCATTTTGTGAAAGGAAAGAATATCATTTATCTGAGACAGTCTAGAGCTATAAACCAATTTCAAGGAGTTATGTATGATTATATCCGTTTAGAAAGACCACCAAACTCAACCAATTGA 2010 0.3995 MTMQLCFFFLLLLGASSSDKTTLRKSLRKNNSIQTPSSSNFAVKLNEENHQQLVIDNGIVSVTLSIPEGYVIGVSYNGIENVLEPQNEEQDRGKTQYLSKCRIHGTNFSVIASDENMVELSFLRAWTASMEGSNVPINIDIRYILRRGDSGFYSYAIFDRPDEGFPGVEVDQIRFVYKLLKDRFSYMALSSTRQRTMPTMRDRETGQILAYPEAVLLTKPSNPQFRGEVDDKYQYSCENSENNVHGWISLQPDEPVGFWIITPSNEFRNGGPIKQDLTSHVGPFTLSMFVSTHYAGKEVTMSFQQGDTYKKVFGPVFVYLNSASISDDPLSLWSDAINQLSKEVKAWPYDFPLSPDYFPPDQRGIVLGRLLVQDWCVKGGRLQYANNAYVGLALPGDAGSWQKESKGYQFWTQADSKGYFAIKNVVPGDYNLYAWVPGFIGDYKYNSTITITPGGVIKLDQLVYSPPRNGPTIWEIGIPDRTAVEFYVPDPYPTLMNKLYTEQRKDKFRQYGLWERYSDMYPNEDLVYTVGVNKYNRDWFYAHVTRNMGNKTYEPTTWQIIFEHRNDIIEGNYTLQLALASAADAELQVRFNDPSVYPAHFGTGPIGGDNAIARHGIHGLHRLYSIDVPSHHFVKGKNIIYLRQSRAINQFQGVMYDYIRLERPPNSTN 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04811 669 CDD RGL4_C 474 662 - -
Arst3g04811 669 Pfam Polysaccharide lyase family 4, domain III 472 661 IPR029411 -
Arst3g04811 669 SUPERFAMILY Starch-binding domain-like 358 461 IPR013784 GO:0030246
Arst3g04811 669 SUPERFAMILY Galactose-binding domain-like 469 662 IPR008979 -
Arst3g04811 669 CDD RGL4_N 52 332 - -
Arst3g04811 669 Pfam Rhamnogalacturonate lyase family 38 229 IPR010325 -
Arst3g04811 669 Gene3D - 469 662 - -
Arst3g04811 669 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 44 665 - -
Arst3g04811 669 Pfam Polysaccharide lyase family 4, domain II 386 458 IPR029413 -
Arst3g04811 669 Gene3D - 42 340 IPR014718 GO:0030246
Arst3g04811 669 CDD RGL4_M 362 459 IPR029413 -
Arst3g04811 669 FunFam Rhamnogalacturonate lyase B 359 459 - -
Arst3g04811 669 SUPERFAMILY Galactose mutarotase-like 49 328 IPR011013 GO:0003824|GO:0005975|GO:0030246
Arst3g04811 669 Gene3D - 362 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04811 Arst-Chr3 123788145 123794896 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04811 53 666 Polysaccharide Lyase AT1G09910 54.647 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04811 K18195 - gmx:100776664 1042.72