Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04799 ATGGAGCTATCTCAACTTGGTTTCCTTGAGGAACTTATGCTTGCTCCAAGAAAAGACACATGGAGTAGTTGTACTAGTAATGATGTCTTCTCACCTTCTTCTTGGAACTACTTTGACCCTTTTCTTGATACCCCTTCTTCTTCTTCCTTTCCTCCTTCTGCATTCTCACCCCCACCACCAGACTGCCCATTCACCACCTCATACCCTTTTCCCGATGATGCCTTCACAATGCCTGACCTTGACTCTTCCTACACCACCAAGTATGAATATGAATATGATGATGCACCACCACCCCCACTCCCACATAACCATCAAGATCTTGATGACGATAATAATAACCCTTCAGTGCTGGACGATGAAGATGCTGGATTTCTTGGCTGCAAGGTTGAGGAACAAGCTGTCGTGGATGTTCAGGTTCATGTTCCTGTGGTCTTCAACATGGGCATGTGTGGGATAGGGGAGAAAAAGAACAAGTCCAAGAAGCTTGAAGGCCAGCCATCAAAGAATCTTATGGCTGAAAGAAGGAGAAGGAAGCGCCTCAATGACCGTCTCTCTATGCTAAGATCAATTGTCCCCAAGATCAGCAAGATGGACAGAACTTCCATTCTTGGAGATACCATAGACTACATGAAAGAGCTTCTGGAGAGGATTAACAAGTTGCAAGAGGAAGAAGTGGAGGAGGGCACAAGTCAGCAAAATCTCTTGGGGGTTTCTAAGGAACTCAAGCCAAATGAAGCGATGGTTAGAAATTCACCCAAGTTCGATGTTGAGAGGAGAGACAAGGACACCAGGATCAGCATCTGTTGTGCCACGAAGCCAGGATTATTATTGTCAACAGTGAATACATTGGAAGCATTAGGCCTTGAGATTCAGCAATGTGTCATAAGTAGCTTCAATGATTTCTCAATGCAAGCATCTTGCTCAGAGGTATCTGAGCAGAGAAATTGTGTTGACCCTGAAGAGATAAAGCAAGCACTATTCAGAAATGCAGGCTATGGTGGGAGATGCCTCTAG 1014 0.4487 MELSQLGFLEELMLAPRKDTWSSCTSNDVFSPSSWNYFDPFLDTPSSSSFPPSAFSPPPPDCPFTTSYPFPDDAFTMPDLDSSYTTKYEYEYDDAPPPPLPHNHQDLDDDNNNPSVLDDEDAGFLGCKVEEQAVVDVQVHVPVVFNMGMCGIGEKKNKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERINKLQEEEVEEGTSQQNLLGVSKELKPNEAMVRNSPKFDVERRDKDTRISICCATKPGLLLSTVNTLEALGLEIQQCVISSFNDFSMQASCSEVSEQRNCVDPEEIKQALFRNAGYGGRCL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04799 337 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 226 IPR036638 GO:0046983
Arst3g04799 337 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 121 331 - -
Arst3g04799 337 MobiDBLite consensus disorder prediction 89 114 - -
Arst3g04799 337 CDD ACT_UUR-ACR-like 263 304 - -
Arst3g04799 337 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 164 213 IPR011598 GO:0046983
Arst3g04799 337 Pfam Helix-loop-helix DNA-binding domain 170 213 IPR011598 GO:0046983
Arst3g04799 337 Coils Coil 203 223 - -
Arst3g04799 337 SMART finulus 170 219 IPR011598 GO:0046983
Arst3g04799 337 Gene3D - 153 214 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04799 Arst-Chr3 123693687 123695839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04799 28 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 50.148 1.04e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst3g04799 HLH 7.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04799 - - gmx:100806571 400.208