Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04761 ATGGCACCAGTTTCATTGCCTCCTGGTTTTAGGTTCCACCCTACAGACGAAGAACTGGTTGCTTATTACCTTAAAAGGAAGATCAATGGCCGTAAAATTGATCTCGAGATCATTCCTGAAGTTGATCTATACAAGTGCGAACCGTGGGACTTGCCAGGGAGGTCGTTGTTGCCGGGTAAGGATTTGGAGTGGTACTTCTTTAGCCCTCGGGACAGGAAGTATCCAAATGGGTCAAGAACCAACAGAGCAACGAAATGCGGGTACTGGAAGGCCACTGGAAAGGACAGGAAGGTAAATTCGCAGAGCCGCGCCGTAGGGATGAAGAAAACCCTTGTGTACTACCGAGGCAGGGCGCCTCACGGGTCTCGCACTGGTTGGGTCATGCACGAGTACCGTCTTCATGAGAGGGAATGCGAAACCAATGCTGCTTCTGGCTTGCAGGATGCCTATGCTCTTTGCCGTGTCTTCAAGAAGGCGGCGGTCATACTCCCCAAAGTGGCAGATCACTATGCTGGTAACAATATCATGATGATGACAACTGATTCTCAAGGAACACCCCAAGTCTTTGACACCATGCCTTGGGATCATCATATTGGGCATAATGGTAAATGCCCACACTTATCTCAGGATCCATTCCTCAATAACCTTCCATCTTCATCATCCTCCTCATTTCCTCACTATGGAGCCCTAACTTACTCTCCATCTAAGGTGGATGTAGCACTAGAGTGTGCAAGGATGCAGCACAGTTTTTCCATGCCTCCATTGGAGGTAGTGGAGGAATTCCCTAATGTGGGAATTTCAGAGCTCAACATTATGACACGTGGCACCACTTCAATGTGTGGAGGAAGCATGAACAATAACAATGAATCGGATATCTTGCAACAGATTCTTTCACTTGCTAATGCTAATGTTTCTTCCCATGAATTCACAAATCAATCAAACCATTCACACACATTATTGGCTGGCAACAATAATGCAAATTATTCTGCTCCTCATCATCACGAACATGATTTTGCTTTTAATGCTGGCACAAGTTACACTAATCACGCCGTAAATGATATGAACCCCATGAGATATGAAATCCAACATCAAAACCTAAGAACAATAGAGATTGGAGATCTTGAAAGCGAGTTCAAGAGCTTTATGGAAGAGCAAAAGACGGTTCCGATTGAGGATATATCAAGCTTCCAAACAAACATACAAGAAAATGAGGTTCAAGAATCTGAGCTACACAACAGCAACAAAGAATTCAGTGAAGCTGACATTGACAATTTCTCAATGGGGTTCATCAACGATGGTGACCCAAATGAGAACTTCATCGATGAAGATGACAACATTGATTATTCAAATTCCACAAGCTTTGAGGTCCTTGAAGAAACCAAGGTTAGCCATGGAATGTTTGTGGCGACTCGCCGAGTAGCCGACACATTCTTTCATCAGATTGTTCCTTCACAAACCATCAAAGTTCAACTGAATCCAGTAACAATAATGGGCAACAATTCTTCCATGGAGATGCTCAAGAATAATCAAGAGTCTTTGTTCAAGAAGCTGATGATGATGAAGTCACCAAATACATTAGCAAGTGCTATTGTATTTATCTTTGCACTATTGTTGACGCTTTGTGTTAATTTGAAGGGGCAAGTTGAAAATTATTGGGCATCAAGAAGTGATGATGATACGATTAATGTGAAGAAGAAATGTTGCTATGGTGCTAATAGAAGCATGAAGAGAATGAAACAAGTAGCTCACAAGATCATATGGAACCAGCAAGAAAAATCTTGGTGTGTTGGAATTAAAAGTGGGAGAGGATTTAGTGTGGTGTTGAAGAAAATTGGTATTTTCCTCTCCATATCTTTGGCTCTTTGTACCATGTGGGTTAACCATGTTACAATTAGTCCTTAA 1902 0.4243 MAPVSLPPGFRFHPTDEELVAYYLKRKINGRKIDLEIIPEVDLYKCEPWDLPGRSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKCGYWKATGKDRKVNSQSRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLHERECETNAASGLQDAYALCRVFKKAAVILPKVADHYAGNNIMMMTTDSQGTPQVFDTMPWDHHIGHNGKCPHLSQDPFLNNLPSSSSSSFPHYGALTYSPSKVDVALECARMQHSFSMPPLEVVEEFPNVGISELNIMTRGTTSMCGGSMNNNNESDILQQILSLANANVSSHEFTNQSNHSHTLLAGNNNANYSAPHHHEHDFAFNAGTSYTNHAVNDMNPMRYEIQHQNLRTIEIGDLESEFKSFMEEQKTVPIEDISSFQTNIQENEVQESELHNSNKEFSEADIDNFSMGFINDGDPNENFIDEDDNIDYSNSTSFEVLEETKVSHGMFVATRRVADTFFHQIVPSQTIKVQLNPVTIMGNNSSMEMLKNNQESLFKKLMMMKSPNTLASAIVFIFALLLTLCVNLKGQVENYWASRSDDDTINVKKKCCYGANRSMKRMKQVAHKIIWNQQEKSWCVGIKSGRGFSVVLKKIGIFLSISLALCTMWVNHVTISP 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04761 633 ProSiteProfiles NAC domain profile. 6 158 IPR003441 GO:0003677|GO:0006355
Arst3g04761 633 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 323 - -
Arst3g04761 633 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Arst3g04761 633 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Arst3g04761 633 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Arst3g04761 633 FunFam Nac domain-containing protein 86 15 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04761 Arst-Chr3 123234955 123238561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04761 1 624 NAC Transcription Factor Family AT1G65910 41.642 4.25e-140 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst3g04761 NAM 2.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04761 - - ahf:112791681 1228