Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04738 ATGAAACCAAGATTTGATCTGGAATTGGAGGCCTCAGCAGCAGAATATGAATCTGAAGTTAGCAGCCAGGTTGCTTCCAACATATCCTCTCTTCAAGAAACCTCTGCAGGCCCTTCAACTGACACCTTAACCAACTCTTACAAACTCGCGAATCCAATGGAGTTCGATGCTCTCTCGCTTGATTTAACTCTCAGCTTTGGCAACAATGAAACAGGGGAAAAAGCAGGGGATTCAATAGGACTCTCATTCTCTAGCACTAGTGAAAGCAGCAATGAACCAACTTTCCAAACTGGCACTGTACCAAGAGTCTTCTCTTGCAATTACTGCCAGCGCAAATTTTTCAGCTCGCAGGCTCTTGGAGGCCACCAGAACGCGCACAAGAGGGAGCGAACGCTGGCAAAGCGTGCCATGCGAATGGGGCTATTCTCTGAGAGGTATGCTAGTTTAGCATCTCTGCCTCTTCACGGTTCTTTCAGATCCCTGGGGATTAAGGCACACTCTTCAGTTCATCACCAAGCATTTGCACCATCAATTAGGCCTCCTGAGATAAAAACAAATGCAAGATTCGACCAAGGTTATGTCGGCCTTCCAATATTCTTGGAGGATGATGAGTCAGAACTGCTCTGGCCTGGTAGTTTCCGGCAGGTTACTAGCGAAGGAGGCGATAGCAATCAGGCATTCGTGCTGGCCAGGAGTTCGAATTTGAGTTTTACTGAGGTGAATCCACCAGTTGAGATAGATAACTCTACACCTGAATTAACATTGAAGCTTTAA 774 0.4651 MKPRFDLELEASAAEYESEVSSQVASNISSLQETSAGPSTDTLTNSYKLANPMEFDALSLDLTLSFGNNETGEKAGDSIGLSFSSTSESSNEPTFQTGTVPRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGLFSERYASLASLPLHGSFRSLGIKAHSSVHHQAFAPSIRPPEIKTNARFDQGYVGLPIFLEDDESELLWPGSFRQVTSEGGDSNQAFVLARSSNLSFTEVNPPVEIDNSTPELTLKL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04738 257 FunFam Zinc finger protein 2 81 150 - -
Arst3g04738 257 MobiDBLite consensus disorder prediction 78 96 - -
Arst3g04738 257 ProSiteProfiles Zinc finger C2H2 type domain profile. 104 131 IPR013087 -
Arst3g04738 257 MobiDBLite consensus disorder prediction 77 96 - -
Arst3g04738 257 SUPERFAMILY beta-beta-alpha zinc fingers 102 131 IPR036236 -
Arst3g04738 257 ProSitePatterns Zinc finger C2H2 type domain signature. 106 126 IPR013087 -
Arst3g04738 257 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 25 183 IPR044246 GO:0009788
Arst3g04738 257 Gene3D Classic Zinc Finger 84 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04738 Arst-Chr3 123054139 123056975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04738 102 257 C2H2 Transcription Factor Family AT1G66140 51.366 8.84e-53 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst3g04738 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04738 - - gmx:100794851 350.517