Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04735 ATGGTTTTGTCTTGGACCAAAAGAAAGGTCTTCCGCCATCTCCGTAAGGTGACAAAGGAGGATCAACCTCCCTCCGCCGATGACATTGTCATCCCCGTGCACTTTTGCTGCCCAGTGAGCTTGGACATTATGAAAGACCCCGTTACCCTCTCAACCGGCATAACCTACGACAGGGACAGCATCGACAAGTGGCTTGAATCCGGTAACAACACCTGCCCCGTCACCAAACAGCTCCTAACTACCTCCGACATGATCCCCAACCACGCCATCAGAAAGATGATTCAGGATTGGTGCGTCGATAACAGCTCCCATGGCGTCCAGAGGATCCCCACTCCTAGGGTTCCCCTTTCCAGATACGACGTTTCCCGGGAATGTAAGACCTTGTTGTCCGGTTCACAGCACGGTGATGACGCCACGTGTCGGGAATCTTTGGCCAAGATCAAGGCTTGGGGGAAGGAGAACGAGAGGAACAAGAGGTGCGTCGTTGGCAACGGTTCCGCTGATGTACTCGCACGTGCGTTTCAGAATTTCTCACGTGATTCGTTCGACAAGCACGTGGTTGTCTTGGCAGAGATTTTGGAGAATCTGACGTGGATGCTTCCTATTGGCGAAGAGGGTAAAGGGTGTTTGGGCTCGGAAAATTCGTTGACTCGGTTGGTTTTGTTCCTAGGTGGTAATGACCTTGGAGCAAGACAAGGTGCTTCTTTGGTGATTAAGGAGCTAAGTGCTGAAGCACTGGAGAAAAATGAACAACTTGTTGAGTCTTTGGTTAAGATGATTAGGGAGCCAATTGGTCCAATTGCTACAAAATCATGTTTGGCCACAATTTCCAATTTGGTTTCATTAGCACAAAGTAGAGAACTAATTGCAGAGAGATTTGTGGAATTAGGTTTGGTCTCATTGCTGTTGGATATCATTCTTGATGGTGAAAGAGGGATAACTGAGAAGGCATTGGGGGTCTTGGATTCCATTTGTGATTTCCAAAAGGGGAAGGATTTTGCCAAGAGCAATGCTCTAATGGTTCCCCTTGCAATCAAGAAGATCTTGAGGGTGTCAGAATTGGCCTCTAGCTTTGCGGTTTCTATACTTTGGAAGGTGTGGGATAAGAGTGATGAAGGGGCTCTGATTGAGGCCCTTCAAGTTGGTGCCTTTCAGAAATTGTTGGTTGTGTTGCAAGTTGGTTGTGATGATAGCACTAAGGAGAAGGCTACTGAGTTGCTCAAACTGTTGAATGCTTATCGAGGCAAGGCACAGTGTGTTGATTCTTCTTCATTGGAACTCAACTACCTTAAGAAGTCATTCTAA 1305 0.4736 MVLSWTKRKVFRHLRKVTKEDQPPSADDIVIPVHFCCPVSLDIMKDPVTLSTGITYDRDSIDKWLESGNNTCPVTKQLLTTSDMIPNHAIRKMIQDWCVDNSSHGVQRIPTPRVPLSRYDVSRECKTLLSGSQHGDDATCRESLAKIKAWGKENERNKRCVVGNGSADVLARAFQNFSRDSFDKHVVVLAEILENLTWMLPIGEEGKGCLGSENSLTRLVLFLGGNDLGARQGASLVIKELSAEALEKNEQLVESLVKMIREPIGPIATKSCLATISNLVSLAQSRELIAERFVELGLVSLLLDIILDGERGITEKALGVLDSICDFQKGKDFAKSNALMVPLAIKKILRVSELASSFAVSILWKVWDKSDEGALIEALQVGAFQKLLVVLQVGCDDSTKEKATELLKLLNAYRGKAQCVDSSSLELNYLKKSF 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04735 434 CDD RING-Ubox_PUB 32 84 IPR045210 -
Arst3g04735 434 FunFam RING-type E3 ubiquitin transferase 31 103 - -
Arst3g04735 434 Pfam U-box domain 31 102 IPR003613 GO:0004842|GO:0016567
Arst3g04735 434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 109 IPR013083 -
Arst3g04735 434 PANTHER WDSAM1 PROTEIN 29 420 IPR045185 GO:0061630
Arst3g04735 434 ProSiteProfiles U-box domain profile. 30 104 IPR003613 GO:0004842|GO:0016567
Arst3g04735 434 SMART Ubox_2 34 97 IPR003613 GO:0004842|GO:0016567
Arst3g04735 434 SUPERFAMILY ARM repeat 128 406 IPR016024 -
Arst3g04735 434 SUPERFAMILY RING/U-box 19 106 - -
Arst3g04735 434 Gene3D - 119 417 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04735 Arst-Chr3 123029809 123031480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04735 20 434 U-box Gene Family AT5G37490 45.735 1.17e-113 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04735 - - gmx:548086 534.643