Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04730 ATGGTTGATGCTGACTCAGCAAAGAAAGTTTCTAAAACCCCTTCTACACCTAGTGTTGCAATAGGTGGATCAAAGACACTATTTGTTGGAAACCTGTCATTTAGTTTGCAACGATCTGACTTCGAGGAGTTTTTCAAAGATTGTGGAGAAGTAGTTGATGTTCGTTTTTCTGTTGACGATGCTGGGAGGTTTAAACGCTTTAGACATGTTGAGTTTGCTATTGCAGAGGCAGCACAAAATGCTCTTGAATTGAATGAGCATGAGTTGTTGAATCATCTTGTTAGGCTTGATTTAGCTCGTGAAAGAGTTTCAGCAATTCCTTCCAGAAAGGTGATCAGCATCAAACTGGTCAAACTATATTCATAA 366 0.3907 MVDADSAKKVSKTPSTPSVAIGGSKTLFVGNLSFSLQRSDFEEFFKDCGEVVDVRFSVDDAGRFKRFRHVEFAIAEAAQNALELNEHELLNHLVRLDLARERVSAIPSRKVISIKLVKLYS 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04730 121 SMART rrm1_1 26 97 IPR000504 GO:0003723
Arst3g04730 121 SUPERFAMILY RNA-binding domain, RBD 15 105 IPR035979 GO:0003676
Arst3g04730 121 Gene3D - 2 105 IPR012677 -
Arst3g04730 121 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 8 100 - -
Arst3g04730 121 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 27 94 IPR000504 GO:0003723
Arst3g04730 121 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 25 101 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04730 Arst-Chr3 122875787 122889035 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04730 17 115 Eukaryotic Initiation Factors Gene Family AT1G71770 29.907 8.04e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04730 K11294 - adu:107481034 209.149