Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04711 ATGGCATCTTCCTTAGACATGTCACTTGATGATAGAATAAAGAACAGGAGTAACAGAGGGAGAGCTAGAGGACGTGGTAGAGCCCGTTCTGGCCGTGGAGCAAGCGGGACTCTTGGTGGTGGGAGAATGAATGGTACTGTTAATGGTAGAAGAATGATGACTGGTGCTGTTAGTGCTGGAAGAATGACTGGTGCTGCTCGCAGAGGTCCTCTAATGGTTAATGCTCGGCCATCGTCTTATGCTATCGCCAAGTCCATTCGCAGAGCCAGGCCTTTTCCATGGCAGCATGATTTATTTGAAGATAGCCTTCGAGCTGCTGGCATACAAGGAATTGAAGTTGGCACCAAGTTGTATGTGTCGAACTTGGACCATGGAGTAACCAATGAAGACATAAGGGAACTTTTCGCTGAGCTTGGAGAGTTGAAGCGCTATGCTGTTCATTATGACAAAAATGGGCATCAAAGTGGTTCTGCAGAAGTTGTTTATACTAGAAGAAGTGATGCATTTGCTGCTCTTAAACGATATAACAATGTCCTTTTGGATGGAAAACCTATGAAGATTGAGATTGTTGGTGCCAATGCAGAGTTACCTGTAACGGCTCGTGTGAATGTCACTGGAGTTAATGGGCAGAGGAAACGGACTGTTGTGATGGCGCCAAGAGGAGGGCGAGGTGGAGGTCCTGCTGTCCCTAATCGTGGTGCTGGCATTGGTGCTGGTTGGGGACATCGTGGCGGCCCCCCAAGGAGTGGGAATGGACGAGGTCGAGGTCGGGGGCGTGGCAGGGCCGGTGTCCGAGGCCGTGGGAAAAAGGATGCTGTTGAGAAGTCAGTCGAGCAACTTGATAAAGAATTGGAGAACTATCATGCTGATGCCATGCAGTTCTGA 885 0.4927 MASSLDMSLDDRIKNRSNRGRARGRGRARSGRGASGTLGGGRMNGTVNGRRMMTGAVSAGRMTGAARRGPLMVNARPSSYAIAKSIRRARPFPWQHDLFEDSLRAAGIQGIEVGTKLYVSNLDHGVTNEDIRELFAELGELKRYAVHYDKNGHQSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGANAELPVTARVNVTGVNGQRKRTVVMAPRGGRGGGPAVPNRGAGIGAGWGHRGGPPRSGNGRGRGRGRGRAGVRGRGKKDAVEKSVEQLDKELENYHADAMQF 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04711 294 Coils Coil 270 290 - -
Arst3g04711 294 SMART FoP_duplication_2 219 293 IPR025715 -
Arst3g04711 294 Pfam C-terminal duplication domain of Friend of PRMT1 225 289 IPR025715 -
Arst3g04711 294 MobiDBLite consensus disorder prediction 1 49 - -
Arst3g04711 294 MobiDBLite consensus disorder prediction 217 276 - -
Arst3g04711 294 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 115 192 IPR000504 GO:0003723
Arst3g04711 294 CDD RRM_THOC4 115 189 - -
Arst3g04711 294 SMART rrm1_1 116 188 IPR000504 GO:0003723
Arst3g04711 294 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 117 185 IPR000504 GO:0003723
Arst3g04711 294 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 5 293 - -
Arst3g04711 294 SUPERFAMILY RNA-binding domain, RBD 109 189 IPR035979 GO:0003676
Arst3g04711 294 Gene3D - 111 191 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04711 Arst-Chr3 122608236 122612149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04711 114 189 Eukaryotic Initiation Factors Gene Family AT2G23350 39.474 3.80e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04711 K12881 - gmx:100801491 384.8