Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04682 ATGGCACTGGCCAGAGACCAAATTCCTCATGATTCAAGCATGGGAAGCAAGGTTCAAAGTTGTGTTTTCAATGAAAATAATGAGTACCACAAATCAGTGCTAGAAGAGGAAGATGGCTCACAAAGCACCAATGGGTTCAGCAATGATTCAGCTATAACCCATTCTCCTCCTCTATGTGGCAATGCCTATGCTTATAAGGCCACAAACTATCAACTTGAGGAGGAACAACAATCTCTGATTGATTTCAAAGGTAGTTGCTACAACACTTTAACACAAGTAGCTAGTGAATCTTTGCTTAACTTTGAGCAGAACAGAATGGTCCCTGGCAACAGCTACATGAAAGATGACACTAATGTTTGGGACAACAATCTGCATCATCAATGGAGTCAGATTAGTCCAAGAAGCACTTCAGAGCTGCGACCGGTGCAGGATTCAAGTTGCTTCCAGTCTTCTAGTAGTAGCTACAGCACCATAGTCAACAGTGCAAAAGAGAAGCAATTACATGGTGAGAGTTCATCATATGGTTGGTTCTATTCTCAACAAACTATACCTGCTCATAGCATCCAGGACCCTGCAGTTCAAGAACCAATATCCAAAAAGCGCATTTCAATGCAGGCTGAGAAAATGAAAGCTGCCAAGAAGCAATGCACAGATGAGAGTAAAATGCCAAAATCCAACAAGTTAGGAGCATCCAAGGATCCTCAAAGTGTTGCTGCTAAGAATAGAAGAGAGAGGATAAGTGAGCGGCTCAAGATACTACAAGAACTAGTTCCCAATGGCTCCAAAGTTGATTTGGTTACAATGCTGGAGAAAGCAATTAGCTATGTGAAGTTTCTTCAGCTTCAAGTGAAGGTGTTGGCAGCTGATGAATTTTGGCCTGTTCAAGGTGGAAAAGCTCCTGATATCTCTCAAGTAAAAGAAGCCATTGATGCAATTCTTTCATCCCAAAGATCAGAGAAACAAGTTCAGCAACCTCAAAGTAGATGA 987 0.4174 MALARDQIPHDSSMGSKVQSCVFNENNEYHKSVLEEEDGSQSTNGFSNDSAITHSPPLCGNAYAYKATNYQLEEEQQSLIDFKGSCYNTLTQVASESLLNFEQNRMVPGNSYMKDDTNVWDNNLHHQWSQISPRSTSELRPVQDSSCFQSSSSSYSTIVNSAKEKQLHGESSSYGWFYSQQTIPAHSIQDPAVQEPISKKRISMQAEKMKAAKKQCTDESKMPKSNKLGASKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAADEFWPVQGGKAPDISQVKEAIDAILSSQRSEKQVQQPQSR 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04682 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 232 288 IPR036638 GO:0046983
Arst3g04682 328 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 92 295 IPR045843 GO:0003700|GO:0006355
Arst3g04682 328 FunFam Transcription factor bHLH83 229 287 - -
Arst3g04682 328 Gene3D - 223 287 IPR036638 GO:0046983
Arst3g04682 328 CDD bHLH_AtIND_like 231 293 - -
Arst3g04682 328 MobiDBLite consensus disorder prediction 213 241 - -
Arst3g04682 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 230 279 IPR011598 GO:0046983
Arst3g04682 328 SMART finulus 236 285 IPR011598 GO:0046983
Arst3g04682 328 Pfam Helix-loop-helix DNA-binding domain 240 280 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04682 Arst-Chr3 122334830 122336640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04682 74 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 47.347 2.75e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst3g04682 HLH 1.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04682 - - gmx:100810010 383.259