Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04679 ATGGAGAGTCCTCATTCTCCTTCTTCTTTCCCTTCCTCGCCTTCCTATTCATCCTCCTCAGAGGGCCAGAGCGCCGACGGCATCTTCGACGCCGACGAGCCCCGCACGCCCCTCGCAGTCCGCCGGGCCCTCCAGCTCCTCTACTCCGGCGACCCTGAACTCCAGGTCCAGGCAGCTCGCGACATCCGGAGGCTCACCAAGACCTCCCCCCGCTGCCGCCGACAGCTCTCTGAAGCTGTCGGTCCGCTCGTTTCCATGCTCCGAGTCGACTCGTCCGAGTCACACGAACCCGCGCTCCTCGCCTTGCTCAACCTCGCCGTCAAGGATGAAAAGAACAAAATCAATATTGTAGAGGCTGGCGCATTAGAACCCATAATCAGTTTCCTCAAGTCAGAAGATCTAAATCTGCAGGAATCTGCAACTGCATCTTTGCTCACACTCTCTGCCTCTTCAACAAACAAACCGATCATCAGCGCTAGCGGAGCCATTCCTCTTCTCGTGGACATCCTGAGAGATGGAACCCCACAAGCCAAAGCTGATGCAGTTATGGCTCTCTCTAACTTATCAACGTACCCCAATAACCTCAGCATCACCCTCCAAACAAATCCAATCCCTTTCATAGTCAACATTCTCAAAACCTGCAAGAAATCATCAAAAACAGCTGAAAAATGCTGTTCCTTGATAGAATCCTTGATGGAGTACGACGAGGGAAGAATCGCCCTGACATTGGAAGAAGGCGGCGTGCTGGCAGTTGTGGAGGTTCTTGAGAGCGGGACACTCCAGAGCAGGGAGCACGCCGTTGGAGCGCTATTGACAATGTGCGAAAGCGACAGGTGTAAATACAGGGAACCAATCCTTAGAGAAGGCGTGATCCCGGGACTTCTGGAGCTAACTGTTCAGGGGACTCCAAAGTCTCAGTCGAAGGCACGCACCCTTTTGCAGCTGCTAAGAGAGTCTCCTTACCCGAGATCTGAAATTCAGCCAGACACTCTTGAGAACATAGTGTGCAACATCATTTCACAGATTGATGGGGATGATCAATCTGGTAAAGCAAAGAAGATGCTGGCTGAGATGGTGCAAGTTAGCATGGAACAGAGTTTAAGGCATTTACAGCAAAGGGCTCTTGTATGCACACCCACAAGTGATCTTCCTATTGCTTCAGAAGTTCCTTCAAAATCATAG 1182 0.5169 MESPHSPSSFPSSPSYSSSSEGQSADGIFDADEPRTPLAVRRALQLLYSGDPELQVQAARDIRRLTKTSPRCRRQLSEAVGPLVSMLRVDSSESHEPALLALLNLAVKDEKNKINIVEAGALEPIISFLKSEDLNLQESATASLLTLSASSTNKPIISASGAIPLLVDILRDGTPQAKADAVMALSNLSTYPNNLSITLQTNPIPFIVNILKTCKKSSKTAEKCCSLIESLMEYDEGRIALTLEEGGVLAVVEVLESGTLQSREHAVGALLTMCESDRCKYREPILREGVIPGLLELTVQGTPKSQSKARTLLQLLRESPYPRSEIQPDTLENIVCNIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPTSDLPIASEVPSKS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04679 393 Gene3D - 244 378 IPR011989 -
Arst3g04679 393 PANTHER U BOX DOMAIN-CONTAINING 24 322 - -
Arst3g04679 393 SUPERFAMILY ARM repeat 42 341 IPR016024 -
Arst3g04679 393 SMART arm_5 235 275 IPR000225 GO:0005515
Arst3g04679 393 SMART arm_5 68 107 IPR000225 GO:0005515
Arst3g04679 393 SMART arm_5 150 190 IPR000225 GO:0005515
Arst3g04679 393 SMART arm_5 109 149 IPR000225 GO:0005515
Arst3g04679 393 Gene3D - 38 243 IPR011989 -
Arst3g04679 393 MobiDBLite consensus disorder prediction 1 32 - -
Arst3g04679 393 Pfam Armadillo/beta-catenin-like repeat 110 147 IPR000225 GO:0005515
Arst3g04679 393 MobiDBLite consensus disorder prediction 1 25 - -
Arst3g04679 393 FunFam U-box domain-containing protein 4 26 376 - -
Arst3g04679 393 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 120 162 IPR000225 GO:0005515
Arst3g04679 393 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 161 194 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04679 Arst-Chr3 122295027 122298781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04679 40 317 U-box Gene Family AT2G23140 34.286 3.49e-39 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04679 - - gmx:100809684 615.15