Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04667 ATGAGAAAACCTTGTTGCGACAAGGAAGGTACCAACAAAGGTGCTTGGTCCAAGCAAGAAGACCAAAAACTCATTGACTACATCCACCTTCATGGCGAAGGCTGTTGGCGTTCCCTTCCAAAAGCCGCCGGCCTTCATCGTTGCGGTAAAAGCTGCCGACTCAGATGGATCAATTATTTACGACCCGACATTAAACGCGGCAACTTTGCCCCAGACGAAGAAGATCTCATCATCAAACTCCATGCCCTCCTTGGCAACCGGTGGTCACTTATAGCGGGAAGGTTGCCAGGACGCACCGACAATGAAGTCAAGAACTACTGGAATTCTCACATCCGCAGGAAGCTCATCAACATGGGAATTGATCCAAACAACCACAAGTTATATCAAACATCTCCTCTTCTTCCTCACAAGTTCATGCTCTAA 423 0.4775 MRKPCCDKEGTNKGAWSKQEDQKLIDYIHLHGEGCWRSLPKAAGLHRCGKSCRLRWINYLRPDIKRGNFAPDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRRKLINMGIDPNNHKLYQTSPLLPHKFML 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04667 140 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Arst3g04667 140 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Arst3g04667 140 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Arst3g04667 140 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Arst3g04667 140 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Arst3g04667 140 SMART sant 65 113 IPR001005 -
Arst3g04667 140 SMART sant 12 62 IPR001005 -
Arst3g04667 140 CDD SANT 68 111 IPR001005 -
Arst3g04667 140 CDD SANT 15 60 IPR001005 -
Arst3g04667 140 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Arst3g04667 140 Gene3D - 13 65 - -
Arst3g04667 140 Gene3D - 68 131 - -
Arst3g04667 140 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Arst3g04667 140 FunFam MYB transcription factor 67 128 - -
Arst3g04667 140 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 124 - -
Arst3g04667 140 FunFam MYB-related transcription factor 12 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04667 Arst-Chr3 122196199 122197666 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04667 2 131 MYB Transcription Factor Family AT4G38620 76.923 4.95e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst3g04667 Myb_DNA-binding 2.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04667 K09422 - qsu:112003172 268.855