LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst3g04648	ATGAAAAAGGTTGGCAGTGCAGTCAAAATCCATAAAAACCTCGTGACTATTCCATCAAAAAAGAATAAACAAACACGTTTGATTTTCCAACACACTTCACTCCCTTTTACTTCCCCTTCAATCCATCATGAAAATTCTTCAATAAGCATCATCGCTAACTCTTTTTTTTTTTTTCCTTCTTTGATCTGTCTCGAGCAGAAATTCAACCCTCCTATTATGGCAAAAACACTGCTGCTTCTTTTTTTCCTCTCAGCTCTGACCTCAAGGATTACTCACCAACAAGAGATCTTCTTTGAAGGCTTCAATGGTGGTGAAGCCGCCGCAAACATGTCCCTAAACGGTGGCGCAGTTATTTACCAAAGCGGCACACTTGGTTTAACAAACGACACTCAGAAGGTAGTTGGTCACGCGTTTTACTCGACCCCAATCCAATTCAAGAACAAGAGCAAAGTTGTCTCCTTTTCCACCGCATTTGCATTCGCAATAGTCCCTCAGTACCCAACACTCGGTGGCCATGGCTTCGCCTTCACCATTGCTCCCTCCAAGGACCTTCCCAACGGTTACCCAAGCCAGTACTTGGGCCTCCTCGGCCCAAAAAACCTCGGCAACTTCTCCAACCACCTCTTCGCGGTGGAGTTTGACACCGTTCAAGACTTCGAGTTCGGAGACATCAGTGACAATCACGTGGGCGTTAACCTCAACAACATGGCCTCCAACAAATCCGTTAAAGCAACCGTTTTGGGACAAGAAGAGCTGAACTTGAAGAGTGGCAAAGTGATTCAAGCATGGGTTGATTATGACTCCTCAAAGAACCAACTGGAGGTTCGTCTCTCCCAAACCTCAACAAAGCCCAATTCTCCTATCTTGTCGTACGAGGTTGATCTCTCACCGATTCTCAAGGACTCCATGTACGTTGGATTCTCCTCTTCAACAGGGATGCTAGCTAGCTCTCACTATATCTTGGGCTGGAGCTTCAACATCAACAATGGAGACGCCAAAACCCTCTCCTTGAAGAACCTCCCTCCACTCCCTTCGCGAGACAAACCCCATAGAAGGTCCTTAATCTTAGGGCTCTCTCTCTCAGCTTCGATATTGCTCCTCTGCTCCATTGCCTTATCATTCTACCTCACCAAAAAGCTGAAAAACGCAGAAGTAATCGAACCGTGGGAGCTAGAAGTTGGTCCACATAGGTTCCCCTACAAGGAGCTGAAGAAAGCTACCAGAAACTTCCACCACAAGAACATGCTCGGCTTCGGCGGCTTCGGCGCGGTTTTCAAGGGAACACTGGCAAACAACACCGAAATCGCAGTGAAGCGAGTCTCCCATGACTCCAAACAGGGATTCCAAGAATTCGTGTCGGAAATCGAGACCATAGGCAGGTTGCGCCACAGGAACCTCGTACAGCTCCAAGGTTGGTGCAGAAACCAGATCGATCTTCTATTAGTATACGACTTCATGCCAAACGGAAGCTTGGACAAGCACCTGTTCGAAGATTCACCAAGAAAAACGCTAACATGGGAACAGAGGTTCAAGATTGTGAAGGGCGTGGCTTGCGGACTCTTGTACCTTCACGAGGAATGGGAACAGACGGTGATTCACAGGGATATCAAAGCAGGGAACGTTCTGTTGGACGCTGACATGAACGCGCGCCTCGGCGACTTTGGTTTGGCCAAGCTATATGAGCGTGGTTCCAACCCGAGCACCACCAGGGTGGTAGGGACGCTGGGGTACCTTGCGCCAGAGCTAACGAGGACGGGGAGGCCAAGCACGTCTTCCGATGTTTATGCGTTTGGGGCGCTGCTGTTGGAGGTGGTGTGCGGGAGGAGGCCGGTGGAGGCGAAGGCGCTGCCGGAGGAGCTTGTTCTGGTGGAGTGGGTGTGGGACCGGTGGCGCTTGGGGGCGGTGTTGGAGGTGGTGGACCCCAAGCTTGGCGGAGTTTATGATGAGCTGGAGGTTGTGGTGGTTATCAAGTTGGGGTTGCTGTGTTCGTGTGAGGTGCCGGAAATGAGGCCAACTATGAGGCAGGTTGTGCGCTTCTTGGAAGGGGAGATCCCGTTGCCGGAGGGGATTCCTCCGCCGGATGGCTTTGGTGGTGGAAAGTCTGGACATTCGTATGGCGGGAACACGTGGTTGTCGCCGCTTGATGATGACGTGGAGGGTGCTTTGTTTTCTGGTACAAGGGATGAGGATGGTAGGTAG	2199	0.5061	MKKVGSAVKIHKNLVTIPSKKNKQTRLIFQHTSLPFTSPSIHHENSSISIIANSFFFFPSLICLEQKFNPPIMAKTLLLLFFLSALTSRITHQQEIFFEGFNGGEAAANMSLNGGAVIYQSGTLGLTNDTQKVVGHAFYSTPIQFKNKSKVVSFSTAFAFAIVPQYPTLGGHGFAFTIAPSKDLPNGYPSQYLGLLGPKNLGNFSNHLFAVEFDTVQDFEFGDISDNHVGVNLNNMASNKSVKATVLGQEELNLKSGKVIQAWVDYDSSKNQLEVRLSQTSTKPNSPILSYEVDLSPILKDSMYVGFSSSTGMLASSHYILGWSFNINNGDAKTLSLKNLPPLPSRDKPHRRSLILGLSLSASILLLCSIALSFYLTKKLKNAEVIEPWELEVGPHRFPYKELKKATRNFHHKNMLGFGGFGAVFKGTLANNTEIAVKRVSHDSKQGFQEFVSEIETIGRLRHRNLVQLQGWCRNQIDLLLVYDFMPNGSLDKHLFEDSPRKTLTWEQRFKIVKGVACGLLYLHEEWEQTVIHRDIKAGNVLLDADMNARLGDFGLAKLYERGSNPSTTRVVGTLGYLAPELTRTGRPSTSSDVYAFGALLLEVVCGRRPVEAKALPEELVLVEWVWDRWRLGAVLEVVDPKLGGVYDELEVVVVIKLGLLCSCEVPEMRPTMRQVVRFLEGEIPLPEGIPPPDGFGGGKSGHSYGGNTWLSPLDDDVEGALFSGTRDEDGR	732

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst3g04648	732	FunFam	serine/threonine-protein kinase PBS1-like	377	485	-	-
	Arst3g04648	732	FunFam	L-type lectin-domain containing receptor kinase S.4	486	692	-	-
	Arst3g04648	732	ProSitePatterns	Protein kinases ATP-binding region signature.	416	438	IPR017441	GO:0005524
	Arst3g04648	732	MobiDBLite	consensus disorder prediction	690	732	-	-
	Arst3g04648	732	SUPERFAMILY	Protein kinase-like (PK-like)	392	688	IPR011009	-
	Arst3g04648	732	ProSiteProfiles	Protein kinase domain profile.	410	686	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst3g04648	732	Pfam	Protein kinase domain	410	614	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst3g04648	732	Gene3D	-	96	340	-	-
	Arst3g04648	732	CDD	lectin_legume_LecRK_Arcelin_ConA	98	328	IPR001220	GO:0030246
	Arst3g04648	732	SUPERFAMILY	Concanavalin A-like lectins/glucanases	101	333	IPR013320	-
	Arst3g04648	732	Gene3D	Transferase(Phosphotransferase) domain 1	486	688	-	-
	Arst3g04648	732	Pfam	Legume lectin domain	97	339	IPR001220	GO:0030246
	Arst3g04648	732	Gene3D	Phosphorylase Kinase; domain 1	371	485	-	-
	Arst3g04648	732	PANTHER	-	86	684	-	-
	Arst3g04648	732	CDD	STKc_IRAK	416	682	-	-
	Arst3g04648	732	SMART	serkin_6	410	680	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst3g04648	732	FunFam	L-type lectin-domain containing receptor kinase S.4	92	333	-	-
	Arst3g04648	732	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	531	543	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst3g04648	Arst-Chr3	121934735	121937234	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst3g04648	94	694	Receptor kinase-like Gene Family	AT3G55550	60.458	0.0	745

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Arst3g04648		Pkinase	5.2e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst3g04648	-		-	adu:107480854	1393.25