Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04645 ATGAAAGGGTTTGGGTCTTCATGTGGAGCATGCAAGTACCTAAGGAGAAGGTGCACAAGAGATTGTGTATTTTCCCCTTACTTCTCCTATGATGAGGCATCAACCCATTTTGCGGCAGTTCATAAGGTGTTTGGTGCTAGCAACGTCTCTAGACTGTTGCTACACCTTCCGTTGCACAACAGAAGTGACGCTGCTATCACCATAACTTACCAAGCTCTCGCTCGCATGCACGATCCTATCTATGGTTGTGTTGCTTATATCTATGTATTGCAGCAACAGGTTGCAAGCTTGCAAAGGGAGATAGATGATATACTAGGAAATAATTTCATGATGAAGAATTCCTCATGTCTTGGTGTTGAGAATTATTGTGGTAGTGTTCATCAATCACCGATGATGAACATCAACAACGGAATAGAGTATATTGTGCAAGAAGGAACAAGGAGTCAATGTTATAAAAGTCAACTAGCTAATCAATTTTCTAGCGATGAAGAAATTGACAGAGAGTATGAAAGATTATTATTGATGGACACAGATCATTTATTATATGGTGAGACAGATCCCATCTCCCTGGAGAAGTTTCTGTCTGAAATTGACCAGGATGTGTTCCTTAATCATCCATGGTTCAAGCATAATAATAATAATGCTGACATTATTGGAAACTAG 663 0.3952 MKGFGSSCGACKYLRRRCTRDCVFSPYFSYDEASTHFAAVHKVFGASNVSRLLLHLPLHNRSDAAITITYQALARMHDPIYGCVAYIYVLQQQVASLQREIDDILGNNFMMKNSSCLGVENYCGSVHQSPMMNINNGIEYIVQEGTRSQCYKSQLANQFSSDEEIDREYERLLLMDTDHLLYGETDPISLEKFLSEIDQDVFLNHPWFKHNNNNADIIGN 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04645 220 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Arst3g04645 220 Pfam Lateral organ boundaries (LOB) domain 7 102 IPR004883 -
Arst3g04645 220 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04645 Arst-Chr3 121824199 121825589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04645 1 176 AS2 family AT5G06080 51.955 8.59e-56 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst3g04645 LOB 2.5e-33 No_clan