Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04632 ATGGAGTCGTCGTGGTCGTGGTCGCGCTCGATCACCGAGACTGTGAACGGGTCCCACCAATTCACCATCAAGGGTTACTCCTTGGCGAAAGGGATGGGTCCGGGCAGGCACATTATGAGCGGCACCTTCAACGTCGGTGGTTATGATTGGGCCATTTACTTCTACCCTGATGGCAAGAACCCTGACGACAATTCCACCTACGTTTCGGTCTTCATTGCACTGGCCAGCGAGGGAACCGATGTCAGGGCGTTGTTCAAGCTCACGCTGCTCGATCAGACCCAGAACGGCAACCATAAAGTCCACAGTCATTTCGATCGCCCACTAGAGAGGGGCCCTTACACCATCAAGTACAGAGGCAGCATGTGGGGTTACAAGCGATTCTTTAAAAGAGCGTTACTGGAAACATCAGAATATCTGAAAGACGATTGCCTTATCATGCAATGCACTGTAGGTGTTGTGAAAACCCGTCTTGAGGGTTTTAAACCGGGGCTCATTGTGCCAGATTCAGACATGGGCCGAGACTTTAAGGACTTGTTGGAATCCGAAATTGGTTTTGACATAGTTTTCAAGGTCAAGAGTGAAAGCTTCAAAGCTCATAAGTTGATACTTGCTGCCCGATCTCCTGTCTTCAGAGAGCAGTTTTCTGGAGGAGTTGGGGATCCTAGCATAGATGAAATAGTGGTTGATGATATTGAGCCTTTTGTCTTCAAGGCAATGCTTCTCTTCATTTACACAGACAAACTTCCTGAGATGTCCGATATTATGGGCTCAATAAATATGTGCTCGTGTACTGTCATGGTGCAGAATCTGTTAGCTGCTGCTGATCTCTATAATCTTGATCGTCTAAAACTACTGTGTGAATCAAAATTGAGTGAAAAAATCAACACTGACACTGTTGCCACAACACTTGCCCTGGCTGAGAAACATCATTGTCCGCAGCTTAAGGCCATCTGTTTAAAATTTATTGCAAATCCAGTAAACATAGGAGTGGTAATGCTGTCGGAAGCTTTTGAACATTTGAAAGAAGGTTACCCTAAGATGCTGTCGGAATTGCTCAAGACATTTGCATCAGTAGATGATAATTCAAGCCAACCATCAAGCAGGAAAAGAAGTGGCAGCAGAATACACCGGCAAGATTTAGTGGATGGTGCTGCTGCTGAATCTGTTAATCCAAATGGCAGGTCTCTCAGGAGGCGTACATGGTGA 1206 0.461 MESSWSWSRSITETVNGSHQFTIKGYSLAKGMGPGRHIMSGTFNVGGYDWAIYFYPDGKNPDDNSTYVSVFIALASEGTDVRALFKLTLLDQTQNGNHKVHSHFDRPLERGPYTIKYRGSMWGYKRFFKRALLETSEYLKDDCLIMQCTVGVVKTRLEGFKPGLIVPDSDMGRDFKDLLESEIGFDIVFKVKSESFKAHKLILAARSPVFREQFSGGVGDPSIDEIVVDDIEPFVFKAMLLFIYTDKLPEMSDIMGSINMCSCTVMVQNLLAAADLYNLDRLKLLCESKLSEKINTDTVATTLALAEKHHCPQLKAICLKFIANPVNIGVVMLSEAFEHLKEGYPKMLSELLKTFASVDDNSSQPSSRKRSGSRIHRQDLVDGAAAESVNPNGRSLRRRTW 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04632 401 MobiDBLite consensus disorder prediction 358 401 - -
Arst3g04632 401 CDD MATH 17 150 IPR002083 GO:0005515
Arst3g04632 401 CDD BTB_POZ_BPM_plant 171 291 - -
Arst3g04632 401 SUPERFAMILY TRAF domain-like 13 152 - -
Arst3g04632 401 SUPERFAMILY POZ domain 168 292 IPR011333 -
Arst3g04632 401 ProSiteProfiles BTB domain profile. 185 252 IPR000210 GO:0005515
Arst3g04632 401 FunFam BTB-POZ and math domain 1 162 288 - -
Arst3g04632 401 Gene3D - 293 373 - -
Arst3g04632 401 SMART math_3 21 133 IPR002083 GO:0005515
Arst3g04632 401 SMART BTB_4 185 294 IPR000210 GO:0005515
Arst3g04632 401 Pfam BTB/POZ domain 175 293 IPR000210 GO:0005515
Arst3g04632 401 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 11 352 IPR045005 GO:0016567
Arst3g04632 401 ProSiteProfiles MATH/TRAF domain profile. 16 150 IPR002083 GO:0005515
Arst3g04632 401 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 15 155 IPR008974 GO:0005515
Arst3g04632 401 Gene3D Potassium Channel Kv1.1; Chain A 163 289 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04632 Arst-Chr3 121580015 121582620 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Arst3g04632 BTB 3.5e-26 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04632 K10523 - gmx:100778300 635.18