Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04631 ATGGAGTCGTCGTGGTCGTGGTCGCGCTCGATCACCGAGACTGTGAACGGGTCCCACCAATTCACCATCAAGGGTTACTCCTTGGCGAAAGGGATGGGTCCGGGCAGGCACATTATGAGCGGCACCTTCAACGTCGGTGGTTATGATTGGGCCATTTACTTCTACCCTGATGGCAAGAACCCTGACGACAATTCCACCTACGTTTCGGTCTTCATTGCACTGGCCAGCGAGGGAACCGATGTCAGGGCGTTGTTCAAGCTCACGCTGCTCGATCAGACCCAGAACGGCAACCATAAAGTCCACAGTCATTTCGATCGCCCACTAGAGAGGGGCCCTTACACCATCAAGTACAGAGGCAGCATGTGGGGTTACAAGCGATTCTTTAAAAGAGCGTTACTGGAAACATCAGAATATCTGAAAGACGATTGCCTTATCATGCAATGCACTGTAGGTGTTGTGAAAACCCGTCTTGAGGGTTTTAAACCGGGGCTCATTGTGCCAGATTCAGACATGGGCCGAGACTTTAAGGACTTGTTGGAATCCGAAATTGGTTTTGACATAGTTTTCAAGGTCAAGAGTGAAAGCTTCAAAGCTCATAAGTTGATACTTGCTGCCCGATCTCCTGTCTTCAGAGAGCAGTTTTCTGGAGGAGTTGGGGATCCTAGCATAGATGAAATAGTGGTTGATGATATTGAGCCTTTTGTCTTCAAGAATCTGTTAGCTGCTGCTGATCTCTATAATCTTGATCGTCTAAAACTACTGTGTGAATCAAAATTGAGTGAAAAAATCAACACTGACACTGTTGCCACAACACTTGCCCTGGCTGAGAAACATCATTGTCCGCAGCTTAAGGCCATCTGTTTAAAATTTATTGCAAATCCAGTAAACATAGGAGTGGTAATGCTGTCGGAAGCTTTTGAACATTTGAAAGAAGGTTACCCTAAGATGCTGTCGGAATTGCTCAAGACATTTGCATCAGTAGATGATAATTCAAGCCAACCATCAAGCAGGAAAAGAAGTGGCAGCAGAATACACCGGCAAGATTTAGTGGATGGTGCTGCTGCTGAATCTGTTAATCCAAATGGCAGGTCTCTCAGGAGGCGTACATGGTGA 1113 0.4645 MESSWSWSRSITETVNGSHQFTIKGYSLAKGMGPGRHIMSGTFNVGGYDWAIYFYPDGKNPDDNSTYVSVFIALASEGTDVRALFKLTLLDQTQNGNHKVHSHFDRPLERGPYTIKYRGSMWGYKRFFKRALLETSEYLKDDCLIMQCTVGVVKTRLEGFKPGLIVPDSDMGRDFKDLLESEIGFDIVFKVKSESFKAHKLILAARSPVFREQFSGGVGDPSIDEIVVDDIEPFVFKNLLAAADLYNLDRLKLLCESKLSEKINTDTVATTLALAEKHHCPQLKAICLKFIANPVNIGVVMLSEAFEHLKEGYPKMLSELLKTFASVDDNSSQPSSRKRSGSRIHRQDLVDGAAAESVNPNGRSLRRRTW 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04631 370 SMART BTB_4 185 295 IPR000210 GO:0005515
Arst3g04631 370 Pfam BTB/POZ domain 175 292 IPR000210 GO:0005515
Arst3g04631 370 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 11 321 IPR045005 GO:0016567
Arst3g04631 370 CDD MATH 17 150 IPR002083 GO:0005515
Arst3g04631 370 Gene3D Potassium Channel Kv1.1; Chain A 167 263 IPR011333 -
Arst3g04631 370 SUPERFAMILY POZ domain 168 261 IPR011333 -
Arst3g04631 370 MobiDBLite consensus disorder prediction 327 370 - -
Arst3g04631 370 SMART math_3 21 133 IPR002083 GO:0005515
Arst3g04631 370 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 15 155 IPR008974 GO:0005515
Arst3g04631 370 Gene3D - 264 342 - -
Arst3g04631 370 SUPERFAMILY TRAF domain-like 13 152 - -
Arst3g04631 370 ProSiteProfiles BTB domain profile. 185 240 IPR000210 GO:0005515
Arst3g04631 370 ProSiteProfiles MATH/TRAF domain profile. 16 150 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04631 Arst-Chr3 121580015 121582620 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Arst3g04631 BTB 3.6e-18 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04631 K10523 - gmx:100786636 579.711